Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hippocampus_20comes_20[refseq_20GCF_5F001891065.1_202016-12-08]
37,377 sequences; 493,775,940 total letters
Query= NC_003678.1
Length=12602
Score E
Sequences producing significant alignments: (Bits) Value
seq940 95.1 1e-15
>seq940
Length=7378152
Score = 95.1 bits (104), Expect = 1e-15
Identities = 123/165 (75%), Gaps = 4/165 (2%)
Strand=Plus/Plus
Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAA-GAGTGCCAGATACTGTGCTGAGTGTAATAG 5064
||| | ||||| ||||| || ||||| ||| ||| | | ||||||||| || | | |
Sbjct 6853370 AGGCGCTTTGAGATGGATCGTGAACCCGCCGAG-GCCCGCTTCTGTGCTGAATGCAGTCG 6853428
Query 5065 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAAT 5124
| |||| || || || || ||| | ||||| ||||| |||||||||||||| ||
Sbjct 6853429 TCGGCATAGCGCCGAAGAGGGCGACCTGTGGGCCGAGTCCAGCATGTTGGGCCTACGTAT 6853488
Query 5125 CACCTACTTTGCGCTG-ATGGATGGAAAGGTGTATGATATCACAG 5168
||| |||||||| ||| ||||| || || || |||||||| ||||
Sbjct 6853489 CACATACTTTGC-CTGTATGGACGGCAAAGTCTATGATATTACAG 6853532
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40194291542248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |