Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kryptolebias_20marmoratus_20[refseq_20GCF_5F001649575.1_202016-05- 22] 3,073 sequences; 680,366,784 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq35 80.6 2e-11 >seq35 Length=3987237 Score = 80.6 bits (88), Expect = 2e-11 Identities = 98/131 (75%), Gaps = 2/131 (2%) Strand=Plus/Minus Query 5054 GCCAGATACTGTGCTGAGTGTAATAGGCTGC-ATCCTGCTGAGGAAGGTGACTTTTGGGC 5112 ||| | | |||||| || || | | | |||| || ||| ||||| || ||| | ||||| Sbjct 880560 GCCCGCTTCTGTGCAGAATGCAGTCG-CTGCCATAGTGCCGAGGAGGGAGACCTGTGGGC 880502 Query 5113 AGAGTCGAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATGGATGGAAAGGTGTA 5172 ||||| ||||||||||| | ||||| |||||||| ||||| ||||| ||||| Sbjct 880501 CGAGTCCAGCATGTTGGGTTTACGCATCACATACTTTGCTTGTATGGAAGGAAAAGTGTA 880442 Query 5173 TGATATCACAG 5183 |||||| |||| Sbjct 880441 TGATATAACAG 880431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40117013056764