Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kryptolebias_20marmoratus_20[refseq_20GCF_5F001649575.1_202016-05- 22] 3,073 sequences; 680,366,784 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq308 91.5 8e-16 seq1685 84.2 1e-13 >seq308 Length=414302 Score = 91.5 bits (100), Expect = 8e-16 Identities = 78/91 (86%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||| | || |||||| |||||||||| Sbjct 1012 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTATCACACGCGCTCTGGCTCCACCTCT 953 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||||| | |||| || || |||||||||| Sbjct 952 CCGAC-CAAGCGGG-CG-AG-ACGGGCCGGT 926 >seq1685 Length=14820 Score = 84.2 bits (92), Expect = 1e-13 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||||||||||||||||||||| |||||||| ||| | |||| ||||||||||| Sbjct 6483 CTGCCCAGGCATAGTTCACCATCTTTTGGGTCCTATTGCACGAGCTCTGGCTCCACCTCC 6542 Query 897 CCGACG 902 ||||| Sbjct 6543 TCGACG 6548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2860709340354