Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Larimichthys_20crocea_20[refseq_20GCF_5F000972845.1_202015-04-21] 6,014 sequences; 678,938,134 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq211 113 4e-21 >seq211 Length=1735489 Score = 113 bits (124), Expect = 4e-21 Identities = 127/165 (77%), Gaps = 4/165 (2%) Strand=Plus/Minus Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAA-GAGTGCCAGATACTGTGCTGAGTGTAATAG 5064 ||| |||| || ||||| || || ||| ||| ||| | | ||||||||| || || | Sbjct 1589420 AGGCGGTTCGAGATGGATCGTGATCCTGCTGAG-GCCCGGTTCTGTGCTGAATGCAACCG 1589362 Query 5065 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAAT 5124 ||| ||||||||| || ||| | ||||||||||| |||||||||||||| || Sbjct 1589361 TTGCCATAGTGCTGAGGAGGGGGACCTGTGGGCAGAGTCCAGCATGTTGGGCCTGCGTAT 1589302 Query 5125 CACCTACTTTGCGCTG-ATGGATGGAAAGGTGTATGATATCACAG 5168 ||| |||||||| ||| ||||| ||||||||||| ||||| |||| Sbjct 1589301 CACGTACTTTGC-CTGTATGGACGGAAAGGTGTACGATATTACAG 1589258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40208479410736