Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leuciscus_20waleckii_20[genbank_20GCA_5F900092035.1_202016-06-28] 4,888 sequences; 752,538,629 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq4873 84.2 1e-13 seq755 82.4 4e-13 seq631 82.4 4e-13 >seq4873 Length=17659128 Score = 84.2 bits (92), Expect = 1e-13 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||| | | ||| |||||| ||||||||||| Sbjct 788521 CTGCCCAGGCATAGTTCACCATCTTTCGGGTACCATCGCGCGCGCTCTCGCTCCACCTCC 788462 Query 897 CCGACG 902 ||| || Sbjct 788461 CCGGCG 788456 >seq755 Length=203271 Score = 82.4 bits (90), Expect = 4e-13 Identities = 74/91 (81%), Gaps = 4/91 (4%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||| ||||| | | ||| |||||| ||||||||||| Sbjct 154779 CTGCCCAGGCATAGTTCACCATCTTGCGGGTACCATCGCGCGCGCTCTCGCTCCACCTCC 154838 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| |||| | || || |||||||||| Sbjct 154839 CCG--GCGGACCGG--GTGAGACGGGCCGGT 154865 >seq631 Length=56943 Score = 82.4 bits (90), Expect = 4e-13 Identities = 75/91 (82%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||| |||||||||||||||||||||||| | || |||||| ||||||||||| Sbjct 41033 CTGCCCAGACATAGTTCACCATCTTTCGGGTCCCATCGTGCGCGCTCTCGCTCCACCTCC 40974 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| | || ||||| || |||||||||| Sbjct 40973 CCGGC-CGACCGGGT--GAG-ACGGGCCGGT 40947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2860655794224