Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maccullochella_20peelii_20[genbank_20GCA_5F002120245.1_202017-05-09] 18,198 sequences; 633,241,041 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq5161 107 2e-19 >seq5161 Length=50836 Score = 107 bits (118), Expect = 2e-19 Identities = 126/165 (76%), Gaps = 4/165 (2%) Strand=Plus/Plus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAA-GAGTGCCAGATACTGTGCTGAGTGTAATAG 5079 ||| |||| || ||||| || |||||| ||| ||| | | |||||| || || || | Sbjct 10246 AGGCGGTTCGAGATGGATCGTGAACCTGCTGAG-GCCCGGTTCTGTGCCGAATGCAACCG 10304 Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139 ||| ||||||||| || ||| | ||||| ||||| |||||||||||||| || Sbjct 10305 TTGCCATAGTGCTGAGGAGGGGGACCTGTGGGCCGAGTCCAGCATGTTGGGCCTACGTAT 10364 Query 5140 CACCTACTTTGCGCTG-ATGGATGGAAAGGTGTATGATATCACAG 5183 ||| |||||||| ||| |||||||| ||||| |||||||| |||| Sbjct 10365 CACATACTTTGC-CTGCATGGATGGCAAGGTCTATGATATTACAG 10408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40110186660264