Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maccullochella_20peelii_20[genbank_20GCA_5F002120245.1_202017-05-09] 18,198 sequences; 633,241,041 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq7294 105 4e-20 seq2126 78.8 5e-12 >seq7294 Length=19851 Score = 105 bits (116), Expect = 4e-20 Identities = 80/91 (88%), Gaps = 4/91 (4%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| Sbjct 3019 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCC 3078 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 |||| |||| || || || |||||||||| Sbjct 3079 CCGA--CGGTGCGGGCG-AG-ACGGGCCGGT 3105 >seq2126 Length=113878 Score = 78.8 bits (86), Expect = 5e-12 Identities = 57/66 (86%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||||||||||||||||||||| |||||||| |||| | |||| ||||||||| Sbjct 89650 CTGCCCAGGCATAGTTCACCATCTTTTGGGTCCTATCGCACGTGCTCACATTCCACCTCC 89709 Query 897 CCGACG 902 || ||| Sbjct 89710 CCAACG 89715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2860263122604