Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq325 104 2e-18 >seq325 Length=3959912 Score = 104 bits (114), Expect = 2e-18 Identities = 125/165 (76%), Gaps = 4/165 (2%) Strand=Plus/Plus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAA-GAGTGCCAGATACTGTGCTGAGTGTAATAG 5079 ||| | || || ||||| || ||||| ||| ||| | | ||||||||| || ||| | Sbjct 3852364 AGGCGCTTCGAGATGGATCGTGAACCCGCTGAG-GCCCGGTTCTGTGCTGAATGCAATCG 3852422 Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139 ||| || |||||||| ||| | ||||| || ||||||||| ||||||| || Sbjct 3852423 TTGCCATAGCGCCGAGGAAGGGGACCTGTGGGCTGAATCGAGCATGCTGGGCCTACGCAT 3852482 Query 5140 CACCTACTTTGCGCTG-ATGGATGGAAAGGTGTATGATATCACAG 5183 ||| |||||||| ||| |||||||| |||||||||||||| |||| Sbjct 3852483 CACATACTTTGC-CTGTATGGATGGCAAGGTGTATGATATTACAG 3852526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40116795514740