Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq1179 107 2e-19 >seq1179 Length=73509 Score = 107 bits (118), Expect = 2e-19 Identities = 126/165 (76%), Gaps = 4/165 (2%) Strand=Plus/Minus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAA-GAGTGCCAGATACTGTGCTGAGTGTAATAG 5079 ||| |||| || ||||| || || ||| ||| ||| | | |||||| || || || | Sbjct 17840 AGGCGGTTCGAGATGGATCGTGATCCTGCTGAG-GCCCGGTTCTGTGCCGAATGCAACCG 17782 Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139 ||| ||| ||||| || ||| | ||||||||||| |||||||||||||| || Sbjct 17781 TTGCCATAGTGCCGAGGAGGGGGACCTGTGGGCAGAGTCCAGCATGTTGGGCCTGCGTAT 17722 Query 5140 CACCTACTTTGCGCTG-ATGGATGGAAAGGTGTATGATATCACAG 5183 ||| |||||||| ||| ||||||||||||||||| ||||| |||| Sbjct 17721 CACGTACTTTGC-CTGTATGGATGGAAAGGTGTACGATATTACAG 17678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40115559316392