Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16]
35,012 sequences; 585,166,552 total letters
Query= NC_001461.1
Length=12573
Score E
Sequences producing significant alignments: (Bits) Value
seq15738 89.7 4e-14
>seq15738
Length=37774
Score = 89.7 bits (98), Expect = 4e-14
Identities = 122/165 (74%), Gaps = 4/165 (2%)
Strand=Plus/Minus
Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAA-GAGTGCCAGATACTGTGCTGAGTGTAATAG 5079
||| |||| || ||||| || |||||| ||| || | | |||||| || || || |
Sbjct 28376 AGGCGGTTCGAGATGGATCGTGAACCTGCCGAG-GCTCGGTTCTGTGCCGAATGCAACCG 28318
Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139
||| ||||||||| || ||| | ||||| ||||| |||||||||||||| ||
Sbjct 28317 TTGCCATAGTGCTGAGGAGGGGGACCTGTGGGCCGAGTCCAGCATGTTGGGCCTACGTAT 28258
Query 5140 CACCTACTTTGCGCTG-ATGGATGGAAAGGTGTATGATATCACAG 5183
|| |||||||| ||| |||||||| || || || ||||| ||||
Sbjct 28257 TACGTACTTTGC-CTGTATGGATGGCAAAGTCTACGATATTACAG 28214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40102597964016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |