Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16] 35,012 sequences; 585,166,552 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq15738 89.7 4e-14 >seq15738 Length=37774 Score = 89.7 bits (98), Expect = 4e-14 Identities = 122/165 (74%), Gaps = 4/165 (2%) Strand=Plus/Minus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAA-GAGTGCCAGATACTGTGCTGAGTGTAATAG 5079 ||| |||| || ||||| || |||||| ||| || | | |||||| || || || | Sbjct 28376 AGGCGGTTCGAGATGGATCGTGAACCTGCCGAG-GCTCGGTTCTGTGCCGAATGCAACCG 28318 Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139 ||| ||||||||| || ||| | ||||| ||||| |||||||||||||| || Sbjct 28317 TTGCCATAGTGCTGAGGAGGGGGACCTGTGGGCCGAGTCCAGCATGTTGGGCCTACGTAT 28258 Query 5140 CACCTACTTTGCGCTG-ATGGATGGAAAGGTGTATGATATCACAG 5183 || |||||||| ||| |||||||| || || || ||||| |||| Sbjct 28257 TACGTACTTTGC-CTGTATGGATGGCAAAGTCTACGATATTACAG 28214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40102597964016