Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03] 298,139 sequences; 350,448,509 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq213326 109 4e-20 >seq213326 Length=3635 Score = 109 bits (120), Expect = 4e-20 Identities = 124/161 (77%), Gaps = 4/161 (2%) Strand=Plus/Minus Query 5025 GGTTTGAAATGGACCGGGAACCTAA-GAGTGCCAGATACTGTGCTGAGTGTAATAGGCTG 5083 ||||||| ||||| || |||||| ||| ||| | | ||||||||| || || | Sbjct 2087 GGTTTGAGATGGATCGTGAACCTGCTGAG-GCCCGCTTCTGTGCTGAATGCAACCGTTGC 2029 Query 5084 CATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATCACC 5143 ||| |||||||| || ||| | ||||| ||||| |||||||| ||||| ||||| Sbjct 2028 CATAGCGCTGAGGAGGGGGACCTATGGGCGGAGTCCAGCATGTTAGGCCTTCGCATCACA 1969 Query 5144 TACTTTGCGCTG-ATGGATGGAAAGGTGTATGATATCACAG 5183 |||||||| ||| |||||||||||||| |||||||| |||| Sbjct 1968 TACTTTGC-CTGTATGGATGGAAAGGTCTATGATATTACAG 1929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39983840328852