Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq12 93.3 3e-15 >seq12 Length=13897370 Score = 93.3 bits (102), Expect = 3e-15 Identities = 123/167 (74%), Gaps = 8/167 (5%) Strand=Plus/Minus Query 5021 AGGAGGTTTGAAATGGACCGGGAAC---CTAAGAGTGCCAGATACTGTGCTGAGTGTAAT 5077 ||| |||| || ||||| || ||| || || ||| | | ||||||||| || | | Sbjct 1335818 AGGCGGTTCGAGATGGATCGTGAAGTGGCTGAG---GCCCGGTTCTGTGCTGAATGCAGT 1335762 Query 5078 AGGCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAA 5137 | ||| ||||||||| || ||| | ||||| ||||| |||||||||||||| Sbjct 1335761 CGTTACCATAGTGCTGAGGAGGGGGACCTATGGGCCGAGTCAAGCATGTTGGGCCTTCGC 1335702 Query 5138 ATCACCTACTTTGCGCTG-ATGGATGGAAAGGTGTATGATATCACAG 5183 ||||| || ||||| ||| ||||| || ||||| |||||||| |||| Sbjct 1335701 ATCACATATTTTGC-CTGTATGGACGGCAAGGTCTATGATATAACAG 1335656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40114101062700