Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq19640 96.9 3e-16 >seq19640 Length=7253 Score = 96.9 bits (106), Expect = 3e-16 Identities = 120/159 (75%), Gaps = 4/159 (3%) Strand=Plus/Minus Query 5012 TTTGAAATGGACCGGGAACC-TAAGAGTGCCAGATACTGTGCTGAGTGTAATAGGCTGCA 5070 |||||||||||||| || || | || || | | ||||| |||||||| | || Sbjct 2235 TTTGAAATGGACCGCGAGCCGTCTGAA-GCGCGGTTTTGTGCCGAGTGTAACCGTTGCCA 2177 Query 5071 TCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATCACCTA 5130 | || ||||| || ||||| ||||| ||||| |||||| |||||||| |||||||| Sbjct 2176 TAGCGCCGAGGAGGGGGACTTGTGGGCGGAGTCGAGCATGCTGGGCCTCCGCATCACCTA 2117 Query 5131 CTTTGCGCTG-ATGGATGGAAAGGTGTATGATATCACAG 5168 |||||| ||| ||||| || ||||| || || ||||||| Sbjct 2116 CTTTGC-CTGTATGGACGGCAAGGTCTACGACATCACAG 2079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40190091231088