Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq23995 89.7 4e-14 >seq23995 Length=687378 Score = 89.7 bits (98), Expect = 4e-14 Identities = 122/165 (74%), Gaps = 4/165 (2%) Strand=Plus/Minus Query 5006 AGGAGGTTTGAAATGGACCGGGAACC-TAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5064 ||| | |||||||||||||| || || | || || | | ||||| |||||||| | Sbjct 41098 AGGCGTTTTGAAATGGACCGTGAGCCGTCTGA-AGCGCGTTTTTGTGCCGAGTGTAACCG 41040 Query 5065 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAAT 5124 ||| || ||||| || ||||| ||||| ||||| |||||| ||||||| || Sbjct 41039 TTGCCATAGCGCCGAGGAGGGGGACTTGTGGGCGGAGTCGAGCATGCTGGGCCTTCGCAT 40980 Query 5125 CACCTACTTTGCGCTG-ATGGATGGAAAGGTGTATGATATCACAG 5168 ||| |||||||| ||| |||||||| ||||| || || || |||| Sbjct 40979 CACGTACTTTGC-CTGTATGGATGGCAAGGTCTACGACATTACAG 40936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40199411081440