Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13] 18,105 sequences; 801,711,499 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq2058 82.4 4e-13 seq1052 75.2 6e-11 >seq2058 Length=111076 Score = 82.4 bits (90), Expect = 4e-13 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||||||||||||||||||||| |||||||| | || ||||| |||||| ||||| Sbjct 11162 CTGCCCAGGCATAGTTCACCATCTTTTGGGTCCTATCACACACGCTCATGCTCCGCCTCC 11103 Query 897 CCGAC 901 | ||| Sbjct 11102 CTGAC 11098 >seq1052 Length=247518 Score = 75.2 bits (82), Expect = 6e-11 Identities = 69/82 (84%), Gaps = 4/82 (5%) Strand=Plus/Plus Query 846 CATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGG 905 || ||||||||||||||||||||||| | || ||||| ||||||||||||| |||| | Sbjct 47404 CACAGTTCACCATCTTTCGGGTCCTATCACACACGCTCATGCTCCACCTCCCTGACGACG 47463 Query 906 TCGGGTCGTAGTACGGGCCGGT 927 |||| || || |||||||||| Sbjct 47464 -CGGG-CG-AG-ACGGGCCGGT 47481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2860265866290