Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq133681 91.5 1e-14 >seq133681 Length=3831 Score = 91.5 bits (100), Expect = 1e-14 Identities = 120/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080 ||| |||| || ||||| || ||| | | ||| | | ||||||||| || ||| | Sbjct 3406 AGGCGGTTCGAGATGGATCGTGAAGTGACGGAGGCCCGGTTCTGTGCTGAATGCAATCGT 3465 Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140 ||| |||||||| || ||| | ||||| ||||| |||||||||||||| || Sbjct 3466 TGCCATAGCGCTGAGGAGGGGGACCTATGGGCCGAGTCTAGCATGTTGGGCCTTCGTATA 3525 Query 5141 ACCTACTTTGCGCTG-ATGGATGGAAAGGTGTATGATATCACAG 5183 || |||||||| ||| ||||| | ||||| |||||||| |||| Sbjct 3526 ACATACTTTGC-CTGTATGGACTGCAAGGTCTATGATATAACAG 3568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39881224131336