Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_001461.1
Length=12573
Score E
Sequences producing significant alignments: (Bits) Value
seq133681 91.5 1e-14
>seq133681
Length=3831
Score = 91.5 bits (100), Expect = 1e-14
Identities = 120/164 (73%), Gaps = 2/164 (1%)
Strand=Plus/Plus
Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080
||| |||| || ||||| || ||| | | ||| | | ||||||||| || ||| |
Sbjct 3406 AGGCGGTTCGAGATGGATCGTGAAGTGACGGAGGCCCGGTTCTGTGCTGAATGCAATCGT 3465
Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140
||| |||||||| || ||| | ||||| ||||| |||||||||||||| ||
Sbjct 3466 TGCCATAGCGCTGAGGAGGGGGACCTATGGGCCGAGTCTAGCATGTTGGGCCTTCGTATA 3525
Query 5141 ACCTACTTTGCGCTG-ATGGATGGAAAGGTGTATGATATCACAG 5183
|| |||||||| ||| ||||| | ||||| |||||||| ||||
Sbjct 3526 ACATACTTTGC-CTGTATGGACTGCAAGGTCTATGATATAACAG 3568
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 39881224131336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |