Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq92 98.7 8e-17 >seq92 Length=2546385 Score = 98.7 bits (108), Expect = 8e-17 Identities = 124/165 (75%), Gaps = 4/165 (2%) Strand=Plus/Minus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAA-GAGTGCCAGATACTGTGCTGAGTGTAATAG 5079 ||| | || || ||||| || ||||| ||| ||| | | ||||||||| || ||| | Sbjct 924736 AGGCGCTTCGAGATGGATCGTGAACCCGCTGAG-GCCCGGTTCTGTGCTGAATGCAATCG 924678 Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139 ||| || |||||||| ||| | ||||| || ||||||||| |||| || || Sbjct 924677 TTGCCATAGCGCCGAGGAAGGGGACCTGTGGGCTGAATCGAGCATGCTGGGTCTACGCAT 924618 Query 5140 CACCTACTTTGCGCTG-ATGGATGGAAAGGTGTATGATATCACAG 5183 ||| |||||||| ||| |||||||| |||||||||||||| |||| Sbjct 924617 CACATACTTTGC-CTGTATGGATGGCAAGGTGTATGATATTACAG 924574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40115134161648