Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq104 111 1e-20 >seq104 Length=2501731 Score = 111 bits (122), Expect = 1e-20 Identities = 121/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080 ||| | ||||| ||||||||||| || | ||| | | |||||||||||| |||| Sbjct 145210 AGGCGCTTTGAGATGGACCGGGAGCCCCATGAAGCCCGGTTCTGTGCTGAGTGCAATAAA 145269 Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140 | || ||||||||| || ||| | ||||||||||| |||||| ||||||| ||| Sbjct 145270 CGACACAGTGCTGAGGAGGGAGACCTGTGGGCAGAGTCCAGCATGCTGGGCCTGCGGATC 145329 Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCAC 5181 || |||||||| | |||||||| || || ||||| || || Sbjct 145330 ACATACTTTGCCTTTATGGATGGCAAAGTCTATGACATAAC 145370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39990439254024