Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq271823 93.3 2e-16 seq129854 93.3 2e-16 seq106185 93.3 2e-16 seq72323 93.3 2e-16 seq99726 89.7 3e-15 seq2913 89.7 3e-15 >seq271823 Length=237 Score = 93.3 bits (102), Expect = 2e-16 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||| | | ||| ||||||| ||||||||||| Sbjct 122 CTGCCCAGGCATAGTTCACCATCTTTCGGGTACCATCGCGTGCGCTCTAGCTCCACCTCC 181 Query 897 CCGACG 902 |||||| Sbjct 182 CCGACG 187 >seq129854 Length=347 Score = 93.3 bits (102), Expect = 2e-16 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||| | | ||| ||||||| ||||||||||| Sbjct 84 CTGCCCAGGCATAGTTCACCATCTTTCGGGTACCATCGCGTGCGCTCTAGCTCCACCTCC 143 Query 897 CCGACG 902 |||||| Sbjct 144 CCGACG 149 >seq106185 Length=391 Score = 93.3 bits (102), Expect = 2e-16 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||| | | ||| ||||||| ||||||||||| Sbjct 84 CTGCCCAGGCATAGTTCACCATCTTTCGGGTACCATCGCGTGCGCTCTAGCTCCACCTCC 143 Query 897 CCGACG 902 |||||| Sbjct 144 CCGACG 149 >seq72323 Length=423 Score = 93.3 bits (102), Expect = 2e-16 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||| | | ||| ||||||| ||||||||||| Sbjct 302 CTGCCCAGGCATAGTTCACCATCTTTCGGGTACCATCGCGTGCGCTCTAGCTCCACCTCC 243 Query 897 CCGACG 902 |||||| Sbjct 242 CCGACG 237 >seq99726 Length=399 Score = 89.7 bits (98), Expect = 3e-15 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||| | | ||| ||||||| ||||||||||| Sbjct 136 CTGCCCAGGCATAGTTCACCATCTTTCGGGTACCATCGCGTGCGCTCTAGCTCCACCTCC 195 Query 897 CCGA 900 |||| Sbjct 196 CCGA 199 >seq2913 Length=17693 Score = 89.7 bits (98), Expect = 3e-15 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||| | | ||| ||||||| ||||||||||| Sbjct 6440 CTGCCCAGGCATAGTTCACCATCTTTCGGGTACCATCGCGTGCGCTCTAGCTCCACCTCC 6499 Query 897 CCGA 900 |||| Sbjct 6500 CCGA 6503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2852435651964