Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmo_20salar_20[refseq_20GCF_5F000233375.1_202015-06-10] 232,155 sequences; 2,966,890,203 total letters Query= NC_006308.1 Length=2265 Score E Sequences producing significant alignments: (Bits) Value seq205407 91.5 2e-15 >seq205407 Length=1958 Score = 91.5 bits (100), Expect = 2e-15 Identities = 138/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 659 TAATTAGAGCATTAACTATTAATACCATGGCCAAAGATGGGGAAAGAGGGAAATTGCAAA 718 |||| ||||| || || | || || ||| ||||||||| || ||||| ||||| ||| Sbjct 295 TAATAAGAGCTTTGACATTGAACACGATGACCAAAGATGCAGAGAGAGGCAAATTAAAAA 354 Query 719 GAAGAGCAATTGCAACACCCGGTATGATAGTAAGACCATTTTCAAAAATTGTTGAAACTG 778 |||| || |||||||||||||| ||| | | ||| || | | ||||||||| Sbjct 355 GAAGGGCTATTGCAACACCCGGGATGCAAATTAGAGGGTTCGTGTACTTCGTTGAAACTT 414 Query 779 TAGCACAGAA-AATATGTGAGAAATTGAAAGAAAGCGGTCTACCTGTTGGTGGTAATGAG 837 |||| |||| || || || || | || || || || || ||||| |||||||| Sbjct 415 TAGC-TAGAAGCATTTGCGAAAAGCTTGAACAATCTGGACTTCCGGTTGGGGGTAATGAA 473 Query 838 AAGAAAGCAAAACT 851 ||||| || ||||| Sbjct 474 AAGAAGGCCAAACT 487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7121590114630