Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmo_20salar_20[refseq_20GCF_5F000233375.1_202015-06-10] 232,155 sequences; 2,966,890,203 total letters Query= NC_007382.1 Length=1410 Score E Sequences producing significant alignments: (Bits) Value seq63787 1705 0.0 >seq63787 Length=1469 Score = 1705 bits (1890), Expect = 0.0 Identities = 1224/1410 (87%), Gaps = 0/1410 (0%) Strand=Plus/Plus Query 1 ATGAATCCAAATCAAAAGATAATAACAATTGGCTCTGTCTCTCTCACCATTGCAACAGTA 60 |||||||||||||||||||||||||| ||||||||||| |||||||||||| | ||| || Sbjct 21 ATGAATCCAAATCAAAAGATAATAACGATTGGCTCTGTTTCTCTCACCATTTCCACAATA 80 Query 61 TGCTTCCTCATGCAGATTGCCATCCTGGTAACTACTGTGACATTGCATTTTAAGCAACAT 120 |||||| ||||||| ||||||||| || |||||||||| ||||||||||| |||||| || Sbjct 81 TGCTTCTTCATGCAAATTGCCATCTTGATAACTACTGTAACATTGCATTTCAAGCAATAT 140 Query 121 GAGTGCGACTCCCCCGCGAGCAACCAAGTAATGCCGTGTGAACCAATAATAATAGAAAGG 180 || | | |||||||| | | ||||||||| |||| ||||||||||| |||||||||||| Sbjct 141 GAATTCAACTCCCCCCCAAACAACCAAGTGATGCTGTGTGAACCAACAATAATAGAAAGA 200 Query 181 AACATAACAGAGATAGTGTATTTGAATAACACCACCATAGAGAAAGAGATCTGCCCCGAA 240 ||||||||||||||||||||| ||| ||||||||||||||||| || || |||||| || Sbjct 201 AACATAACAGAGATAGTGTATCTGACCAACACCACCATAGAGAAGGAAATATGCCCCAAA 260 Query 241 GTAGTGGAATACAGAAATTGGTCAAAGCCGCAATGTCAAATTACAGGATTTGCACCTTTT 300 || |||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct 261 CCAGCAGAATACAGAAATTGGTCAAAACCGCAATGTGGCATTACAGGATTTGCACCTTTC 320 Query 301 TCTAAGGACAATTCAATCCGGCTTTCTGCTGGTGGGGACATTTGGGTGACGAGAGAACCT 360 |||||||||||||| || ||||||| |||||||||||||| |||||||| ||||||||| Sbjct 321 TCTAAGGACAATTCGATTAGGCTTTCCGCTGGTGGGGACATCTGGGTGACAAGAGAACCT 380 Query 361 TATGTGTCATGCGATCCTGGCAAGTGTTATCAATTTGCACTCGGGCAGGGGACCACACTA 420 ||||||||||||||||||| |||||||||||||||||| || || ||||| || |||||| Sbjct 381 TATGTGTCATGCGATCCTGACAAGTGTTATCAATTTGCCCTTGGACAGGGAACAACACTA 440 Query 421 GACAACAAACATTCAAATGACACAATACATGATAGAATCCCTCATCGAACCCTATTAATG 480 ||||| ||||||||| ||||| ||| |||||| | |||| |||| || ||||| ||| Sbjct 441 AACAACGTGCATTCAAATAACACAGTACGTGATAGGACCCCTTATCGGACTCTATTGATG 500 Query 481 AATGAGTTGGGTGTTCCATTTCATTTAGGAACCAGGCAAGTGTGTGTAGCATGGTCCAGC 540 ||||||||||||||||| |||||| | || |||| ||||||||| |||||||||||||| Sbjct 501 AATGAGTTGGGTGTTCCTTTTCATCTGGGGACCAAGCAAGTGTGCATAGCATGGTCCAGC 560 Query 541 TCAAGTTGTCACGATGGAAAAGCATGGTTGCATGTTTGTGTCACTGGGGATGATAAAAAT 600 ||||||||||||||||||||||||||| ||||||||||| | || ||||||||||||||| Sbjct 561 TCAAGTTGTCACGATGGAAAAGCATGGCTGCATGTTTGTATAACGGGGGATGATAAAAAT 620 Query 601 GCAACTGCTAGCTTCATTTATGACGGGAGGCTTATGGACAGTATTGGTTCATGGTCTCAA 660 |||||||||||||||||||| | ||||||||| | || ||| ||| ||||||||| || Sbjct 621 GCAACTGCTAGCTTCATTTACAATGGGAGGCTTGTAGATAGTGTTGTTTCATGGTCCAAA 680 Query 661 AATATCCTCAGGACCCAGGAGTCGGAATGCGTTTGTATCAATGGGACTTGCACAGTAGTA 720 | || ||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| Sbjct 681 GAAATTCTCAGGACCCAGGAGTCAGAATGCGTTTGTATCAATGGAACTTGTACAGTAGTA 740 Query 721 ATGACTGATGGAAGTGCTTCAGGAAGAGCCGATACTAGAATACTATTCATTGAAGAGGGG 780 ||||||||||||||||||||||||| ||| ||||||| ||||||||||||||| |||||| Sbjct 741 ATGACTGATGGAAGTGCTTCAGGAAAAGCTGATACTAAAATACTATTCATTGAGGAGGGG 800 Query 781 AAAATTGTCCATATTAGCCCATTGTCAGGAAGTGCTCAGCATGTAGAGGAGTGTTCCTGT 840 ||||| || |||| |||| ||||||||||||||||||||||||| || ||||| || || Sbjct 801 AAAATCGTTCATACTAGCACATTGTCAGGAAGTGCTCAGCATGTCGAAGAGTGCTCTTGC 860 Query 841 TATCCTCGATATCCTGACGTCAGATGTATCTGCAGAGACAACTGGAAAGGCTCTAATAGG 900 |||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||| || Sbjct 861 TATCCTCGATATCCTGGTGTCAGATGTGTCTGCAGAGACAACTGGAAAGGCTCCAATCGG 920 Query 901 CCCGTCATAGACATAAATATGGAAGATTATAGCATTGATTCCAGTTATGTGTGCTCAGGG 960 ||| || |||| ||||| || | ||| ||||||||| ||||||||||||||| ||||| Sbjct 921 CCCATCGTAGATATAAACATAAAGGATCATAGCATTGTTTCCAGTTATGTGTGTTCAGGA 980 Query 961 CTTGTTGGCGACACACCCAGAAACGACGACAGATCTAGCAATAGTAATTGCAGGAATCCT 1020 |||||||| |||||||||||||| ||||||| || |||| ||| |||| | ||||| Sbjct 981 CTTGTTGGAGACACACCCAGAAAAAACGACAGCTCCAGCAGTAGCCATTGTTTGGATCCT 1040 Query 1021 AACAATGAGAGAGGGAATCCAGGAGTGAAAGGCTGGGCCTTTGACAATGGAGATGACGTG 1080 |||||||| ||| || ||||||||||||||||||||||| ||||| |||||||| Sbjct 1041 AACAATGAAGAAGGTGGTCATGGAGTGAAAGGCTGGGCCTTTGATGATGGAAATGACGTG 1100 Query 1081 TGGATGGGAAGAACGATCAGCAAGGATTTACGCTCAGGTTATGAAACTTTCAAAGTCATT 1140 |||||||||||||| |||| | || | ||||| ||| |||||||| |||||||||||| Sbjct 1101 TGGATGGGAAGAACAATCAACGAGACGTCACGCTTAGGGTATGAAACCTTCAAAGTCATT 1160 Query 1141 GGTGGTTGGTCCACACCTAATTCCAAATCGCAGATCAATAGACAGGTCATAGTTGACAGC 1200 | || ||||||| ||||| ||||||| |||||| ||||| || |||||||||||||| Sbjct 1161 GAAGGCTGGTCCAACCCTAAGTCCAAATTGCAGATAAATAGGCAAGTCATAGTTGACAGA 1220 Query 1201 AATAATTGGTCAGGTTACTCTGGTATTTTCTCTGTTGAGGGCAAAAGATGCATCAATAGG 1260 | || |||| ||||| |||||||||||||||||||| |||||||| ||||||||| || Sbjct 1221 GGTGATAGGTCCGGTTATTCTGGTATTTTCTCTGTTGAAGGCAAAAGCTGCATCAATCGG 1280 Query 1261 TGCTTTTATGTGGAGTTGATAAGGGGAAGGCAACAGGAGACTAGAGTATGGTGGACCTCA 1320 |||||||||||||||||||| |||||||| || |||| ||| ||| | |||||||||| Sbjct 1281 TGCTTTTATGTGGAGTTGATTAGGGGAAGAAAAGAGGAAACTGAAGTCTTGTGGACCTCA 1340 Query 1321 AACAGTATTGTTGTGTTTTGTGGCACTTCAGGTACTTATGGAACAGGCTCATGGCCTGAT 1380 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 1341 AACAGTATTGTTGTGTTTTGTGGCACCTCAGGTACATATGGAACAGGCTCATGGCCTGAT 1400 Query 1381 GGGGCGAACATCAATTTCATGCCTATATAA 1410 |||||| || ||||| |||||||||||||| Sbjct 1401 GGGGCGGACCTCAATCTCATGCCTATATAA 1430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4392338860480