Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20aleutianus_20[genbank_20GCA_5F001910805.1_202016-12-20] 10,489 sequences; 899,650,391 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq1713 82.4 4e-13 seq526 80.6 2e-12 seq6212 78.8 5e-12 seq2915 78.8 5e-12 seq2869 78.8 5e-12 seq2827 78.8 5e-12 seq2584 78.8 5e-12 seq1654 78.8 5e-12 seq1568 78.8 5e-12 seq946 78.8 5e-12 seq395 78.8 5e-12 seq348 78.8 5e-12 seq321 78.8 5e-12 seq48 78.8 5e-12 seq1275 77.0 2e-11 seq1024 77.0 2e-11 seq724 77.0 2e-11 seq91 77.0 2e-11 seq3743 75.2 6e-11 seq2522 75.2 6e-11 seq1634 75.2 6e-11 seq1596 75.2 6e-11 seq1422 75.2 6e-11 seq1195 75.2 6e-11 seq850 75.2 6e-11 seq844 75.2 6e-11 seq446 75.2 6e-11 seq300 75.2 6e-11 seq267 75.2 6e-11 seq141 75.2 6e-11 seq49 75.2 6e-11 seq34 75.2 6e-11 seq9 75.2 6e-11 seq6 75.2 6e-11 >seq1713 Length=161356 Score = 82.4 bits (90), Expect = 4e-13 Identities = 66/76 (87%), Gaps = 4/76 (5%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGT 911 |||||||||||||||||||| |||||| |||| |||||||||||||||| |||| || Sbjct 71751 TCACCATCTTTCGGGTCCTATCGCATGTGCTCATGCTCCACCTCCCCGA--CGGTGCGGG 71694 Query 912 CGTAGTACGGGCCGGT 927 || || |||||||||| Sbjct 71693 CG-AG-ACGGGCCGGT 71680 >seq526 Length=471351 Score = 80.6 bits (88), Expect = 2e-12 Identities = 67/77 (87%), Gaps = 4/77 (5%) Strand=Plus/Minus Query 851 TTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGG 910 ||||||||||||||||||||| |||| | |||| ||||||||||||||||| || |||| Sbjct 207961 TTCACCATCTTTCGGGTCCTATCGCACGTGCTCTCGCTCCACCTCCCCGACG-GGGCGGG 207903 Query 911 TCGTAGTACGGGCCGGT 927 || || |||||||||| Sbjct 207902 -CG-AG-ACGGGCCGGT 207889 >seq6212 Length=8045 Score = 78.8 bits (86), Expect = 5e-12 Identities = 65/76 (86%), Gaps = 4/76 (5%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGT 911 |||||||||||||||||||| |||| |||||| |||||||||||| ||| |||| || Sbjct 7293 TCACCATCTTTCGGGTCCTATCGCACGCGCTCATGCTCCACCTCCTCGA--CGGTGCGGG 7236 Query 912 CGTAGTACGGGCCGGT 927 || || |||||||||| Sbjct 7235 CG-AG-ACGGGCCGGT 7222 >seq2915 Length=86831 Score = 78.8 bits (86), Expect = 5e-12 Identities = 65/76 (86%), Gaps = 4/76 (5%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGT 911 |||||||||||||||||||| |||| |||||| ||||||||||||||| |||| || Sbjct 84503 TCACCATCTTTCGGGTCCTATCGCACGCGCTCCCGCTCCACCTCCCCGA--CGGTGCGGG 84446 Query 912 CGTAGTACGGGCCGGT 927 || || |||||||||| Sbjct 84445 CG-AG-ACGGGCCGGT 84432 >seq2869 Length=53175 Score = 78.8 bits (86), Expect = 5e-12 Identities = 65/76 (86%), Gaps = 4/76 (5%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGT 911 |||||||||||||||||| | |||| ||||||| ||||||||||||||| |||| || Sbjct 1780 TCACCATCTTTCGGGTCCAATCGCACGCGCTCGCGCTCCACCTCCCCGA--CGGTGCGGG 1837 Query 912 CGTAGTACGGGCCGGT 927 || || |||||||||| Sbjct 1838 CG-AG-ACGGGCCGGT 1851 >seq2827 Length=66409 Score = 78.8 bits (86), Expect = 5e-12 Identities = 53/58 (91%), Gaps = 1/58 (2%) Strand=Plus/Plus Query 854 ACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGT 911 |||||||||||||||||| |||| |||||| ||||||||||||||||| |||||||| Sbjct 19424 ACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCCCCGACG-GGTCGGGT 19480 >seq2584 Length=100229 Score = 78.8 bits (86), Expect = 5e-12 Identities = 65/76 (86%), Gaps = 4/76 (5%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGT 911 ||| |||||||||||||||| |||| |||||| |||||||||||||||| |||| || Sbjct 19596 TCAACATCTTTCGGGTCCTATCGCACGCGCTCATGCTCCACCTCCCCGA--CGGTGCGGG 19653 Query 912 CGTAGTACGGGCCGGT 927 || || |||||||||| Sbjct 19654 CG-AG-ACGGGCCGGT 19667 >seq1654 Length=175561 Score = 78.8 bits (86), Expect = 5e-12 Identities = 65/76 (86%), Gaps = 4/76 (5%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGT 911 |||||||||||||||||||| |||| |||||| ||||||||||||||| |||| || Sbjct 28661 TCACCATCTTTCGGGTCCTAGCGCACGCGCTCACGCTCCACCTCCCCGA--CGGTGCGGG 28718 Query 912 CGTAGTACGGGCCGGT 927 || || |||||||||| Sbjct 28719 CG-AG-ACGGGCCGGT 28732 >seq1568 Length=223804 Score = 78.8 bits (86), Expect = 5e-12 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 193955 TCACCATCTTTCGGGTCCTATCGCATGCGCTCACGCTCCACCTCCCCGACG 193905 >seq946 Length=252545 Score = 78.8 bits (86), Expect = 5e-12 Identities = 65/76 (86%), Gaps = 4/76 (5%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGT 911 |||||||||||||||||||| |||| |||||| ||||||||||||||| |||| || Sbjct 38187 TCACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCCCCGA--CGGTGCGGG 38244 Query 912 CGTAGTACGGGCCGGT 927 || || |||||||||| Sbjct 38245 CG-AG-ACGGGCCGGT 38258 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| |||| |||||| ||||||||||||||||| Sbjct 77791 TCACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCCCCGACG 77741 >seq395 Length=572141 Score = 78.8 bits (86), Expect = 5e-12 Identities = 65/76 (86%), Gaps = 4/76 (5%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGT 911 |||||||||||||||||||| |||| ||||| |||||||||||||||| |||| || Sbjct 131611 TCACCATCTTTCGGGTCCTATCGCACACGCTCATGCTCCACCTCCCCGA--CGGTGCGGG 131554 Query 912 CGTAGTACGGGCCGGT 927 || || |||||||||| Sbjct 131553 CG-AG-ACGGGCCGGT 131540 >seq348 Length=480802 Score = 78.8 bits (86), Expect = 5e-12 Identities = 65/76 (86%), Gaps = 4/76 (5%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGT 911 |||||||||||||||||||| |||| |||||| ||||||||||||||| |||| || Sbjct 190520 TCACCATCTTTCGGGTCCTATCGCAAGCGCTCACGCTCCACCTCCCCGA--CGGTGCGGG 190577 Query 912 CGTAGTACGGGCCGGT 927 || || |||||||||| Sbjct 190578 CG-AG-ACGGGCCGGT 190591 >seq321 Length=548695 Score = 78.8 bits (86), Expect = 5e-12 Identities = 65/76 (86%), Gaps = 4/76 (5%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGT 911 |||||||||||||||||||| |||| |||||| ||||||||||||||| |||| || Sbjct 17428 TCACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCCCCGA--CGGTGCGGG 17485 Query 912 CGTAGTACGGGCCGGT 927 || || |||||||||| Sbjct 17486 CG-AG-ACGGGCCGGT 17499 >seq48 Length=1160228 Score = 78.8 bits (86), Expect = 5e-12 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||| | ||||||||||| |||||||||||||||||| Sbjct 992644 TCACCATCTTTCGGGTCCCATCGCATGCGCTCATGCTCCACCTCCCCGACG 992594 >seq1275 Length=164881 Score = 77.0 bits (84), Expect = 2e-11 Identities = 48/52 (92%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 851 TTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||| |||||||||||| |||| |||||| |||||||||||||||||| Sbjct 128448 TTCACCATGTTTCGGGTCCTATCGCACGCGCTCATGCTCCACCTCCCCGACG 128499 >seq1024 Length=234823 Score = 77.0 bits (84), Expect = 2e-11 Identities = 53/59 (90%), Gaps = 1/59 (2%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGG 910 |||||||||||||||||||| |||| |||||| ||||||||||||||||| | ||||| Sbjct 159786 TCACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCCCCGACG-GTTCGGG 159843 >seq724 Length=311637 Score = 77.0 bits (84), Expect = 2e-11 Identities = 64/75 (85%), Gaps = 4/75 (5%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGT 911 |||||||||||||||||||| |||| |||||| ||||||||||||||| |||| || Sbjct 268090 TCACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCCCCGA--CGGTGTGGG 268147 Query 912 CGTAGTACGGGCCGG 926 || || ||||||||| Sbjct 268148 CG-AG-ACGGGCCGG 268160 >seq91 Length=1003163 Score = 77.0 bits (84), Expect = 2e-11 Identities = 48/52 (92%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGC 903 |||||||||||||| ||||||| || |||||| ||||||||||||||||||| Sbjct 359389 TCACCATCTTTCGGATCCTAACACACGCGCTCATGCTCCACCTCCCCGACGC 359440 >seq3743 Length=52157 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| ||||||||||| ||||||||||||| ||| Sbjct 22908 TCACCATCTTTCGGGTCCTATCGCATGCGCTCACGCTCCACCTCCCCAACG 22958 >seq2522 Length=74744 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| |||| |||||| ||||||||||||||||| Sbjct 66752 TCACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCCCCGACG 66702 >seq1634 Length=139988 Score = 75.2 bits (82), Expect = 6e-11 Identities = 65/77 (84%), Gaps = 4/77 (5%) Strand=Plus/Minus Query 851 TTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGG 910 ||||||||||||||||| ||| |||| |||||| ||||||||||||||| |||| || Sbjct 81058 TTCACCATCTTTCGGGTTCTATCGCACGCGCTCACGCTCCACCTCCCCGA--CGGTGCGG 81001 Query 911 TCGTAGTACGGGCCGGT 927 || || |||||||||| Sbjct 81000 ACG-AG-ACGGGCCGGT 80986 >seq1596 Length=166241 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| |||| | |||| |||||||||||||||||| Sbjct 86947 TCACCATCTTTCGGGTCCTATCGCACGTGCTCATGCTCCACCTCCCCGACG 86897 >seq1422 Length=233463 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| |||| |||||| ||||||||||||||||| Sbjct 232066 TCACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCCCCGACG 232016 >seq1195 Length=184252 Score = 75.2 bits (82), Expect = 6e-11 Identities = 64/76 (84%), Gaps = 5/76 (7%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGT 911 |||||||||||||||||||| || ||| |||| ||||||||||||||| ||||| || Sbjct 109885 TCACCATCTTTCGGGTCCTATCG-ATGAGCTCATGCTCCACCTCCCCG--GCGGTGCGGG 109829 Query 912 CGTAGTACGGGCCGGT 927 ||| |||||||||| Sbjct 109828 CGT--GACGGGCCGGT 109815 >seq850 Length=244436 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| |||| |||||| ||||||||||||||||| Sbjct 103086 TCACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCCCCGACG 103036 >seq844 Length=275041 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| |||| |||||| ||||||||||||||||| Sbjct 14006 TCACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCCCCGACG 13956 >seq446 Length=451977 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| |||| |||||| ||||||||||||||||| Sbjct 217352 TCACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCCCCGACG 217302 Score = 75.2 bits (82), Expect = 6e-11 Identities = 65/77 (84%), Gaps = 4/77 (5%) Strand=Plus/Plus Query 851 TTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGG 910 ||||||||||||||||| ||| | || ||||||| ||||||||||||||| |||| || Sbjct 270486 TTCACCATCTTTCGGGTTCTATCCCACGCGCTCGCGCTCCACCTCCCCGA--CGGTGCGG 270543 Query 911 TCGTAGTACGGGCCGGT 927 || || |||||||||| Sbjct 270544 GCG-AG-ACGGGCCGGT 270558 >seq300 Length=569532 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| |||| |||||| ||||||||||||||||| Sbjct 499118 TCACCATCTTTCGGGTCCTATCGCAGGCGCTCACGCTCCACCTCCCCGACG 499168 >seq267 Length=611708 Score = 75.2 bits (82), Expect = 6e-11 Identities = 63/74 (85%), Gaps = 4/74 (5%) Strand=Plus/Plus Query 854 ACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGTCG 913 |||||||||||||||||| |||| |||||| ||||||||||||||| |||| || || Sbjct 276818 ACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCCCCGA--CGGTGCGGGCG 276875 Query 914 TAGTACGGGCCGGT 927 || |||||||||| Sbjct 276876 -AG-ACGGGCCGGT 276887 >seq141 Length=799617 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| |||| |||||| ||||||||||||||||| Sbjct 470421 TCACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCCCCGACG 470371 >seq49 Length=1153889 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| |||| |||||| ||||||||||||||||| Sbjct 748951 TCACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCCCCGACG 749001 >seq34 Length=1316869 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| |||| |||||| ||||||||||||||||| Sbjct 198410 TCACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCCCCGACG 198460 >seq9 Length=1801976 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| |||| |||||| ||||||||||||||||| Sbjct 1100326 TCACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCCCCGACG 1100376 >seq6 Length=1986606 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| |||| |||||| ||||||||||||||||| Sbjct 845820 TCACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCCCCGACG 845770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2860490553522