Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20] 166,448 sequences; 681,652,711 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq35853 113 4e-21 >seq35853 Length=17335 Score = 113 bits (124), Expect = 4e-21 Identities = 127/165 (77%), Gaps = 4/165 (2%) Strand=Plus/Plus Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAA-GAGTGCCAGATACTGTGCTGAGTGTAATAG 5064 ||| |||| || ||||| || |||||| ||| ||| | | |||||||||||| || | Sbjct 3213 AGGCGGTTCGAGATGGATCGTGAACCTGCTGAG-GCCCGGTTCTGTGCTGAGTGCAACTG 3271 Query 5065 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAAT 5124 ||| ||| ||||| || ||| | ||||| ||||| |||||||||||||| || Sbjct 3272 TTGCCATAGTGCCGAGGAGGGGGACCTGTGGGCCGAGTCCAGCATGTTGGGCCTACGTAT 3331 Query 5125 CACCTACTTTGCGCTG-ATGGATGGAAAGGTGTATGATATCACAG 5168 ||| |||||||| ||| |||||||| |||||||| ||||| |||| Sbjct 3332 CACATACTTTGC-CTGTATGGATGGCAAGGTGTACGATATTACAG 3375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40135902919552