Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20] 166,448 sequences; 681,652,711 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq30431 82.4 4e-13 seq74788 78.8 5e-12 seq61511 78.8 5e-12 seq41575 78.8 5e-12 seq40135 78.8 5e-12 seq25513 78.8 5e-12 seq10874 78.8 5e-12 seq1623 78.8 5e-12 seq68579 77.0 2e-11 seq64614 77.0 2e-11 seq49653 77.0 2e-11 seq153316 75.2 6e-11 seq84542 75.2 6e-11 seq65956 75.2 6e-11 seq54979 75.2 6e-11 seq43163 75.2 6e-11 seq33021 75.2 6e-11 seq10960 75.2 6e-11 seq5823 75.2 6e-11 >seq30431 Length=7594 Score = 82.4 bits (90), Expect = 4e-13 Identities = 66/76 (87%), Gaps = 4/76 (5%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGT 911 |||||||||||||||||||| |||||| |||| |||||||||||||||| |||| || Sbjct 7418 TCACCATCTTTCGGGTCCTATCGCATGTGCTCATGCTCCACCTCCCCGA--CGGTGCGGG 7475 Query 912 CGTAGTACGGGCCGGT 927 || || |||||||||| Sbjct 7476 CG-AG-ACGGGCCGGT 7489 >seq74788 Length=4340 Score = 78.8 bits (86), Expect = 5e-12 Identities = 65/76 (86%), Gaps = 4/76 (5%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGT 911 |||||||||||||||||||| |||| |||||| ||||||||||||||| |||| || Sbjct 3977 TCACCATCTTTCGGGTCCTATCGCACGCGCTCAGGCTCCACCTCCCCGA--CGGTGCGGG 4034 Query 912 CGTAGTACGGGCCGGT 927 || || |||||||||| Sbjct 4035 CG-AG-ACGGGCCGGT 4048 >seq61511 Length=7244 Score = 78.8 bits (86), Expect = 5e-12 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGT 911 ||||||||||| |||||||| ||||||||||| ||||||||||||||| |||| ||| Sbjct 1064 TCACCATCTTTTGGGTCCTATCGCATGCGCTCACGCTCCACCTCCCCGA--CGGTGGGG- 1008 Query 912 CGTAGTACGGGCCGGT 927 || |||||||||| Sbjct 1007 -GTGAGACGGGCCGGT 993 >seq41575 Length=1444 Score = 78.8 bits (86), Expect = 5e-12 Identities = 64/76 (84%), Gaps = 4/76 (5%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGT 911 |||||||||||||||||||| |||| |||||| ||||||||||||||||| || || Sbjct 235 TCACCATCTTTCGGGTCCTATCGCACGCGCTCAAGCTCCACCTCCCCGACGTTGT--GGG 178 Query 912 CGTAGTACGGGCCGGT 927 ||| |||||||||| Sbjct 177 CGT--GACGGGCCGGT 164 >seq40135 Length=7318 Score = 78.8 bits (86), Expect = 5e-12 Identities = 65/76 (86%), Gaps = 4/76 (5%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGT 911 |||||||||||||||||| | ||||||||||| ||||||||||||||| |||| || Sbjct 36 TCACCATCTTTCGGGTCCGATCGCATGCGCTCACGCTCCACCTCCCCGA--CGGTGCGGG 93 Query 912 CGTAGTACGGGCCGGT 927 || || |||||||||| Sbjct 94 CG-AG-ACGGGCCGGT 107 >seq25513 Length=8827 Score = 78.8 bits (86), Expect = 5e-12 Identities = 65/76 (86%), Gaps = 4/76 (5%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGT 911 |||||||||||||||||||| |||| ||||| ||||||||||||||| |||| ||| Sbjct 1024 TCACCATCTTTCGGGTCCTATCGCACACGCTCACGCTCCACCTCCCCGA--CGGTGGGGG 967 Query 912 CGTAGTACGGGCCGGT 927 || || |||||||||| Sbjct 966 CG-AG-ACGGGCCGGT 953 >seq10874 Length=11473 Score = 78.8 bits (86), Expect = 5e-12 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 5958 TCACCATCTTTCGGGTCCTATCGCATGCGCTCACGCTCCACCTCCCCGACG 5908 >seq1623 Length=18635 Score = 78.8 bits (86), Expect = 5e-12 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||| | ||||||||||| |||||||||||||||||| Sbjct 10022 TCACCATCTTTCGGGTCCCATCGCATGCGCTCATGCTCCACCTCCCCGACG 9972 >seq68579 Length=2853 Score = 77.0 bits (84), Expect = 2e-11 Identities = 48/52 (92%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGC 903 |||||||||||||| ||||||| || |||||| ||||||||||||||||||| Sbjct 1569 TCACCATCTTTCGGATCCTAACACACGCGCTCATGCTCCACCTCCCCGACGC 1620 >seq64614 Length=4683 Score = 77.0 bits (84), Expect = 2e-11 Identities = 66/77 (86%), Gaps = 6/77 (8%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGT-CGGG 910 |||||||||||||||||||| || ||| |||| ||||||||||||||| ||||| |||| Sbjct 290 TCACCATCTTTCGGGTCCTATCG-ATGAGCTCATGCTCCACCTCCCCG--GCGGTGCGGG 234 Query 911 TCGTAGTACGGGCCGGT 927 ||| |||||||||| Sbjct 233 GCGT--GACGGGCCGGT 219 >seq49653 Length=13844 Score = 77.0 bits (84), Expect = 2e-11 Identities = 48/52 (92%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 851 TTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||| |||||||||||| |||| |||||| |||||||||||||||||| Sbjct 10318 TTCACCATGTTTCGGGTCCTATCGCACGCGCTCATGCTCCACCTCCCCGACG 10369 >seq153316 Length=4338 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| |||| | |||| |||||||||||||||||| Sbjct 67 TCACCATCTTTCGGGTCCTATCGCACGTGCTCATGCTCCACCTCCCCGACG 17 >seq84542 Length=7349 Score = 75.2 bits (82), Expect = 6e-11 Identities = 66/77 (86%), Gaps = 4/77 (5%) Strand=Plus/Minus Query 851 TTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGG 910 ||||||||||||||||||||| |||| |||||| |||||||||||| |||| | |||| Sbjct 3906 TTCACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCCCTGACGTTG-CGGG 3848 Query 911 TCGTAGTACGGGCCGGT 927 || || |||||||||| Sbjct 3847 -CG-AG-ACGGGCCGGT 3834 >seq65956 Length=8997 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| ||||||||||| ||||||||||||| ||| Sbjct 306 TCACCATCTTTCGGGTCCTATCGCATGCGCTCACGCTCCACCTCCCCAACG 356 >seq54979 Length=7947 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| ||||||||||| ||||||||||||| ||| Sbjct 5825 TCACCATCTTTCGGGTCCTATCGCATGCGCTCACGCTCCACCTCCCCAACG 5875 >seq43163 Length=5791 Score = 75.2 bits (82), Expect = 6e-11 Identities = 46/49 (94%), Gaps = 0/49 (0%) Strand=Plus/Plus Query 854 ACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||| |||| |||||| |||||||||||||||||| Sbjct 4527 ACCATCTTTCGGGTCCTATCGCACGCGCTCATGCTCCACCTCCCCGACG 4575 >seq33021 Length=8998 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| |||| |||||| ||||||||||||||||| Sbjct 1867 TCACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCCCCGACG 1817 >seq10960 Length=5482 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| |||| |||||| ||||||||||||||||| Sbjct 2946 TCACCATCTTTCGGGTCCTATCGCAGGCGCTCACGCTCCACCTCCCCGACG 2996 >seq5823 Length=4827 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| |||| |||||| ||||||||||||||||| Sbjct 2910 TCACCATCTTTCGGGTCCTATCGCACGCGCTCCCGCTCCACCTCCCCGACG 2860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2855889451104