Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20rubrivinctus_20[genbank_20GCA_5F000475215.1_202013-10-22] 68,206 sequences; 756,296,653 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq394 113 4e-21 >seq394 Length=25783 Score = 113 bits (124), Expect = 4e-21 Identities = 127/165 (77%), Gaps = 4/165 (2%) Strand=Plus/Minus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAA-GAGTGCCAGATACTGTGCTGAGTGTAATAG 5079 ||| |||| || ||||| || |||||| ||| ||| | | |||||||||||| || | Sbjct 19814 AGGCGGTTCGAGATGGATCGTGAACCTGCTGAG-GCCCGGTTCTGTGCTGAGTGCAACTG 19756 Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139 ||| ||| ||||| || ||| | ||||| ||||| |||||||||||||| || Sbjct 19755 TTGCCATAGTGCCGAGGAGGGGGACCTGTGGGCCGAGTCCAGCATGTTGGGCCTACGTAT 19696 Query 5140 CACCTACTTTGCGCTG-ATGGATGGAAAGGTGTATGATATCACAG 5183 ||| |||||||| ||| |||||||| |||||||| ||||| |||| Sbjct 19695 CACATACTTTGC-CTGTATGGATGGCAAGGTGTACGATATTACAG 19652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40087616449608