Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20steindachneri_20[genbank_20GCA_5F001910785.1_202016-12- 20] 279,232 sequences; 648,011,071 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq255470 80.6 2e-12 seq190180 78.8 5e-12 seq122768 78.8 5e-12 seq96467 78.8 5e-12 seq37528 78.8 5e-12 seq8193 78.8 5e-12 seq8192 78.8 5e-12 seq258218 77.0 2e-11 seq216929 77.0 2e-11 seq93674 77.0 2e-11 seq186051 75.2 6e-11 seq182918 75.2 6e-11 seq142660 75.2 6e-11 seq123692 75.2 6e-11 seq57893 75.2 6e-11 seq21494 75.2 6e-11 seq7427 75.2 6e-11 >seq255470 Length=775 Score = 80.6 bits (88), Expect = 2e-12 Identities = 67/77 (87%), Gaps = 4/77 (5%) Strand=Plus/Minus Query 851 TTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGG 910 ||||||||||||||||||||| |||| |||||| ||||||||||||||||| | |||| Sbjct 775 TTCACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCCCCGACGTTG-CGGG 717 Query 911 TCGTAGTACGGGCCGGT 927 || || |||||||||| Sbjct 716 -CG-AG-ACGGGCCGGT 703 >seq190180 Length=3709 Score = 78.8 bits (86), Expect = 5e-12 Identities = 66/76 (87%), Gaps = 4/76 (5%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGT 911 ||||||||||| |||||||| |||| |||||| |||||||||||||||||| | |||| Sbjct 2941 TCACCATCTTTTGGGTCCTATCGCACGCGCTCATGCTCCACCTCCCCGACG-GCGCGGG- 2884 Query 912 CGTAGTACGGGCCGGT 927 || || |||||||||| Sbjct 2883 CG-AG-ACGGGCCGGT 2870 >seq122768 Length=366 Score = 78.8 bits (86), Expect = 5e-12 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 314 TCACCATCTTTCGGGTCCTATCGCATGCGCTCACGCTCCACCTCCCCGACG 364 >seq96467 Length=6385 Score = 78.8 bits (86), Expect = 5e-12 Identities = 65/76 (86%), Gaps = 4/76 (5%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGT 911 |||||||||| ||||||||| |||| ||||||| ||||||||||||||| |||| || Sbjct 5075 TCACCATCTTGCGGGTCCTATCGCACGCGCTCGCGCTCCACCTCCCCGA--CGGTGCGGG 5018 Query 912 CGTAGTACGGGCCGGT 927 || || |||||||||| Sbjct 5017 CG-AG-ACGGGCCGGT 5004 >seq37528 Length=3467 Score = 78.8 bits (86), Expect = 5e-12 Identities = 66/76 (87%), Gaps = 4/76 (5%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGT 911 |||||||||||||||||||| ||||||| ||| || |||||||||||||| || |||| Sbjct 3336 TCACCATCTTTCGGGTCCTATCGCATGCACTCACGCCCCACCTCCCCGACG-GGGCGGG- 3393 Query 912 CGTAGTACGGGCCGGT 927 || || |||||||||| Sbjct 3394 CG-AG-ACGGGCCGGT 3407 >seq8193 Length=937 Score = 78.8 bits (86), Expect = 5e-12 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||| | ||||||||||| |||||||||||||||||| Sbjct 18 TCACCATCTTTCGGGTCCCATCGCATGCGCTCATGCTCCACCTCCCCGACG 68 >seq8192 Length=6830 Score = 78.8 bits (86), Expect = 5e-12 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||| | ||||||||||| |||||||||||||||||| Sbjct 6813 TCACCATCTTTCGGGTCCCATCGCATGCGCTCATGCTCCACCTCCCCGACG 6763 >seq258218 Length=1587 Score = 77.0 bits (84), Expect = 2e-11 Identities = 48/52 (92%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGC 903 |||||||||||||| ||||||| || |||||| ||||||||||||||||||| Sbjct 1260 TCACCATCTTTCGGATCCTAACACACGCGCTCATGCTCCACCTCCCCGACGC 1311 >seq216929 Length=883 Score = 77.0 bits (84), Expect = 2e-11 Identities = 64/75 (85%), Gaps = 4/75 (5%) Strand=Plus/Plus Query 853 CACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGTC 912 ||||||||||||||||||| |||| ||||| ||||||||||||||| |||| ||| | Sbjct 1 CACCATCTTTCGGGTCCTATCGCACACGCTCACGCTCCACCTCCCCGA--CGGTGGGGGC 58 Query 913 GTAGTACGGGCCGGT 927 | || |||||||||| Sbjct 59 G-AG-ACGGGCCGGT 71 >seq93674 Length=5000 Score = 77.0 bits (84), Expect = 2e-11 Identities = 48/52 (92%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 851 TTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||| |||||||||||| |||| |||||| |||||||||||||||||| Sbjct 2134 TTCACCATGTTTCGGGTCCTATCGCACGCGCTCATGCTCCACCTCCCCGACG 2083 >seq186051 Length=5690 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 ||||||||||||||||| || |||| |||||| |||||||||||||||||| Sbjct 137 TCACCATCTTTCGGGTCATATCGCACGCGCTCATGCTCCACCTCCCCGACG 87 >seq182918 Length=924 Score = 75.2 bits (82), Expect = 6e-11 Identities = 65/77 (84%), Gaps = 4/77 (5%) Strand=Plus/Plus Query 851 TTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGG 910 ||||||||||||||||| ||| | || ||||||| ||||||||||||||| |||| || Sbjct 599 TTCACCATCTTTCGGGTTCTATCCCACGCGCTCGCGCTCCACCTCCCCGA--CGGTGCGG 656 Query 911 TCGTAGTACGGGCCGGT 927 || || |||||||||| Sbjct 657 GCG-AG-ACGGGCCGGT 671 >seq142660 Length=1435 Score = 75.2 bits (82), Expect = 6e-11 Identities = 52/58 (90%), Gaps = 1/58 (2%) Strand=Plus/Minus Query 854 ACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACGCGGTCGGGT 911 |||||||||||||||||| |||| |||||| |||||||||||||||| |||||||| Sbjct 237 ACCATCTTTCGGGTCCTATCGCACGCGCTCACACTCCACCTCCCCGACG-GGTCGGGT 181 >seq123692 Length=2437 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| |||| |||||| ||||||||||||||||| Sbjct 2063 TCACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCCCCGACG 2113 >seq57893 Length=2587 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| |||| |||||| ||||||||||||||||| Sbjct 53 TCACCATCTTTCGGGTCCTATCGCACGCGCTCCCGCTCCACCTCCCCGACG 3 >seq21494 Length=4247 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| |||| |||||| ||||||||||||||||| Sbjct 2844 TCACCATCTTTCGGGTCCTATCGCAGGCGCTCACGCTCCACCTCCCCGACG 2894 >seq7427 Length=873 Score = 75.2 bits (82), Expect = 6e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 852 TCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGACG 902 |||||||||||||||||||| |||| |||||| ||||||||||||||||| Sbjct 512 TCACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCCCCGACG 562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2852562097536