Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq48 105 4e-20 >seq48 Length=236306 Score = 105 bits (116), Expect = 4e-20 Identities = 80/91 (88%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| Sbjct 164388 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCC 164329 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 |||| |||| || || || |||||||||| Sbjct 164328 CCGA--CGGTGCGGGCG-AG-ACGGGCCGGT 164302 Score = 105 bits (116), Expect = 4e-20 Identities = 80/91 (88%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| Sbjct 175242 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCC 175183 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 |||| |||| || || || |||||||||| Sbjct 175182 CCGA--CGGTGCGGGCG-AG-ACGGGCCGGT 175156 Score = 105 bits (116), Expect = 4e-20 Identities = 80/91 (88%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| Sbjct 186080 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTATCGCACGCGCTCACGCTCCACCTCC 186021 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 |||| |||| || || || |||||||||| Sbjct 186020 CCGA--CGGTGCGGGCG-AG-ACGGGCCGGT 185994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2860788671232