Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20grahami_20[refseq_20GCF_5F001515645.1_202015-12- 16] 31,277 sequences; 1,750,287,761 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq289 91.5 8e-16 seq223 91.5 8e-16 >seq289 Length=2154649 Score = 91.5 bits (100), Expect = 8e-16 Identities = 77/91 (85%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||| | | ||| |||||| ||||||||||| Sbjct 2067766 CTGCCCAGGCATAGTTCACCATCTTTCGGGTACCATCGCGCGCGCTCTAGCTCCACCTCC 2067707 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| ||||| || || || |||||||||| Sbjct 2067706 CCG--GCGGTGCGGGCG-AG-ACGGGCCGGT 2067680 >seq223 Length=2412706 Score = 91.5 bits (100), Expect = 8e-16 Identities = 77/91 (85%), Gaps = 4/91 (4%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||| | | ||| |||||| ||||||||||| Sbjct 334811 CTGCCCAGGCATAGTTCACCATCTTTCGGGTACCATCGCGCGCGCTCTAGCTCCACCTCC 334870 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| ||||| || || || |||||||||| Sbjct 334871 CCG--GCGGTGCGGGCG-AG-ACGGGCCGGT 334897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2859877265946