Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq369 109 4e-20 >seq369 Length=494468 Score = 109 bits (120), Expect = 4e-20 Identities = 124/164 (76%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAA-GAGTGCCAGATACTGTGCTGAGTGTAATAG 5079 ||| | || || ||||| || |||||| ||| ||| | | ||||||||| ||||| | Sbjct 142471 AGGCGATTCGAGATGGATCGTGAACCTGCTGAG-GCCCGGTTCTGTGCTGAATGTAACCG 142413 Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139 | || ||||||||| || ||| | ||||| ||||| |||||||||||||| || Sbjct 142412 GTGCCACAGTGCTGAGGAGGGGGACCTGTGGGCCGAGTCCAGCATGTTGGGCCTTCGCAT 142353 Query 5140 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183 ||| |||||||| ||||| || |||||||||||||| |||| Sbjct 142352 CACATACTTTGCATGTATGGACGGCAAGGTGTATGATATTACAG 142309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40115774150424