Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq14479 84.2 2e-12 >seq14479 Length=1518724 Score = 84.2 bits (92), Expect = 2e-12 Identities = 81/100 (81%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 5090 GCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATCACCTACTTT 5149 || ||||| || ||| | ||||| ||||| |||||||| ||||| ||||| |||||| Sbjct 1217057 GCAGAGGAGGGCGACCTGTGGGCGGAGTCCAGCATGTTAGGCCTGCGCATCACATACTTT 1217116 Query 5150 GCGCTG-ATGGATGGAAAGGTGTATGATATCACAGAGTGG 5188 || ||| |||||||||||||| || || ||||||| |||| Sbjct 1217117 GC-CTGCATGGATGGAAAGGTCTACGACATCACAG-GTGG 1217154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40106767820364