Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq19323 98.7 8e-17 >seq19323 Length=9111 Score = 98.7 bits (108), Expect = 8e-17 Identities = 124/165 (75%), Gaps = 4/165 (2%) Strand=Plus/Minus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAA-GAGTGCCAGATACTGTGCTGAGTGTAATAG 5079 ||| |||| || ||||| || |||||| ||| ||| | | ||||||||| || || | Sbjct 3852 AGGCGGTTCGAGATGGATCGTGAACCTGCTGAG-GCCCGCTTCTGTGCTGAATGCAACCG 3794 Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139 ||| |||||||| || ||| | ||||| ||||| |||||||||||||| || Sbjct 3793 TTGCCATAGCGCTGAGGAGGGGGACCTGTGGGCGGAGTCTAGCATGTTGGGCCTACGCAT 3734 Query 5140 CACCTACTTTGCGCTG-ATGGATGGAAAGGTGTATGATATCACAG 5183 ||| |||||||| ||| |||||||| || || || ||||| |||| Sbjct 3733 CACGTACTTTGC-CTGCATGGATGGCAAAGTCTACGATATTACAG 3690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40058344861416