Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq23283 82.4 4e-13 seq23163 75.2 6e-11 >seq23283 Length=15129 Score = 82.4 bits (90), Expect = 4e-13 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||||||||||||||||||||| |||||||| || | |||||| |||||||||| Sbjct 12261 CTGCCCAGGCATAGTTCACCATCTTTTGGGTCCTATCGTACGCGCTCACACTCCACCTCC 12320 Query 897 CCGAC 901 | ||| Sbjct 12321 CAGAC 12325 >seq23163 Length=55050 Score = 75.2 bits (82), Expect = 6e-11 Identities = 56/66 (85%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||| |||||||||||| ||| |||||||| | || ||||| ||||||||||| Sbjct 18472 CTGCCCAGGTATAGTTCACCATTTTTTGGGTCCTATCACACTCGCTCACGCTCCACCTCC 18413 Query 897 CCGACG 902 || ||| Sbjct 18412 CCAACG 18407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2856874404876