Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq556 145 6e-31 >seq556 Length=1047872 Score = 145 bits (160), Expect = 6e-31 Identities = 139/177 (79%), Gaps = 1/177 (1%) Strand=Plus/Minus Query 5020 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5079 |||||| |||||||||||||||||| || | ||| | |||||||| |||||| | Sbjct 187263 TAGGAGATTTGAAATGGACCGGGAAACTGCCAATGCTCGTTACTGTGCCGAGTGTGGGAA 187204 Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139 ||||||| || || ||||| ||||| ||||||||||| |||||| | || || ||||| Sbjct 187203 AATGCATCCCGCAGAAGAAGGAGACTTCTGGGCAGAGTCTAGCATGCTTGGGCTTAAAAT 187144 Query 5140 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAGAGTGGGCTGGATG 5196 ||| |||||||| ||||| | | || |||| |||||| |||| ||| |||||||| Sbjct 187143 CACATACTTTGCTTTGATGCAGGACAAAGTGTTTGATATAACAG-GTGAGCTGGATG 187088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40107031849584