Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq1171 82.4 4e-13 seq273 78.8 5e-12 >seq1171 Length=550567 Score = 82.4 bits (90), Expect = 4e-13 Identities = 64/74 (86%), Gaps = 3/74 (4%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||| ||||||||||||||||||||||| | ||| ||||||||||||||||| | Sbjct 239969 CTGCCCAGACATAGTTCACCATCTTTCGGGTCATGCCGC--GCGCTCGTGCTCCACCTAC 240026 Query 897 CCGACGCGGTCGGG 910 ||| || || |||| Sbjct 240027 CCGGCG-GGGCGGG 240039 >seq273 Length=1578729 Score = 78.8 bits (86), Expect = 5e-12 Identities = 51/55 (93%), Gaps = 2/55 (4%) Strand=Plus/Minus Query 838 TGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCAC 892 ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct 277522 TGCCCAGGCATAGTTCACCATCTTTCGGGTCCTGCCGC--GCGCTCGTGCTCCAC 277470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2860056903624