Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20laevis_20[refseq_20GCF_5F001663975.1_202016-08-09] 108,033 sequences; 2,718,433,805 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq7 100 2e-18 seq5 86.0 4e-14 >seq7 Length=144084680 Score = 100 bits (110), Expect = 2e-18 Identities = 80/91 (88%), Gaps = 4/91 (4%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| Sbjct 109107239 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTATCGCGCGCGCTCACGCTCCACCTCC 109107298 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 |||| | || |||| || || |||||||||| Sbjct 109107299 CCGATG-GGGCGGG-CG-AG-ACGGGCCGGT 109107325 >seq5 Length=144167370 Score = 86.0 bits (94), Expect = 4e-14 Identities = 58/64 (91%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||| ||| ||| || ||||||||||| Sbjct 88798419 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTATCGC--GCGGTCACGCTCCACCTCC 88798476 Query 897 CCGA 900 |||| Sbjct 88798477 CCGA 88798480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2857612810434