Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= NC_024296.1
Length=8914
Score E
Sequences producing significant alignments: (Bits) Value
seq41 104 1e-18
>seq41
Length=21727748
Score = 104 bits (114), Expect = 1e-18
Identities = 206/301 (68%), Gaps = 8/301 (3%)
Strand=Plus/Plus
Query 677 TTTTGAGTCTCCCGGGAAGGAATTCATGGATCAAATAAAACTTGTTGCAAGTTATGCACA 736
||||||||| || || | ||| ||||||||||||| | | |||||||||||||| ||
Sbjct 2208139 TTTTGAGTCACCAGGAAGAGAACTCATGGATCAAATTAGGATGGTTGCAAGTTATGCTCA 2208198
Query 737 AATGACGACATATACTACTATCAAGGAATACCTTAGTGAGTGCATGGATGCAACACTTAC 796
||||| || || | || ||||| | |||||| | ||||||||||||| ||||| |
Sbjct 2208199 GATGACAACTTACTCAACCATCAAACAGTACCTTGATCAGTGCATGGATGCTACACTCGC 2208258
Query 797 CATTCCAGCAGTGGCCCACGAAAT---CAAGGATTT-TATTAAGGTTTCATCTGATCTTA 852
| ||||| || || ||||| ||| |||| | | | || ||||| |
Sbjct 2208259 GCTCCCAGCTGTCGCATCTGAAATTCCCAA--ATTTCTCTACACTGAGCA--GGATCTCA 2208314
Query 853 AAGCGGAACATGGAGAACTCTTCAAGTTCCTTGGTGCCATACGCCATCCAGACGCCATCA 912
| ||| ||||||| || ||||| | || ||||| || ||||| || | ||||
Sbjct 2208315 GAAGTAAACTTGGAGAATGGTTTGAGTTCATGGGAGCCATTCGACATCCTGAAGTAATCA 2208374
Query 913 AGCTGGCTCCGCGGAACTTCCCGAACTTGGCGTCAGCAGCATTTTACTGGAGCAAAAAGG 972
|||| || || || ||||| ||| | | || || || ||| ||||||| ||||
Sbjct 2208375 AGCTTGCCCCAAGGTCATTCCCAAACCTATCTTCTGCCGCCCTTTTCTGGAGCCGCAAGG 2208434
Query 973 A 973
|
Sbjct 2208435 A 2208435
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 28403048036000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |