Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19] 20,500 sequences; 4,210,110,458 total letters Query= NC_030690.1 Length=8930 Score E Sequences producing significant alignments: (Bits) Value seq41 159 2e-35 >seq41 Length=21727748 Score = 159 bits (176), Expect = 2e-35 Identities = 261/369 (71%), Gaps = 12/369 (3%) Strand=Plus/Plus Query 612 AGCTATCGACTGGATTAATGGTCAACCATGGGTTGGAT-CCTTAGTCTTA-TCTT-TAAT 668 ||||||||||||||| || ||||||||||| ||| ||||| || |||| |||| Sbjct 2208073 AGCTATCGACTGGATCAACTCTCAACCATGGGCAGGAAACCTTATACTCGGTCTTCTAAT 2208132 Query 669 TACTACAGACTTTGAATCACCCGGGAAAGAATTCATGGATCAGATCAAGCTGGTTGCCAG 728 ||||| ||||| ||||| || | |||| |||||||||| || | | ||||||| || Sbjct 2208133 GACTACT---TTTGAGTCACCAGGAAGAGAACTCATGGATCAAATTAGGATGGTTGCAAG 2208189 Query 729 TTATGCACAAATGACAACATACACTACAATCAAAGAGTACCTTAGTGAATGCATGGATGC 788 |||||| || |||||||| ||| | || |||||| |||||||| | | ||||||||||| Sbjct 2208190 TTATGCTCAGATGACAACTTACTCAACCATCAAACAGTACCTTGATCAGTGCATGGATGC 2208249 Query 789 AACACTAACGATTCCCGCAGTAGCATATGAGAT---CAAGGAGTTCATTAAGACTTCGTC 845 ||||| || | || || || |||| ||| || ||| | ||| | | ||| | Sbjct 2208250 TACACTCGCGCTCCCAGCTGTCGCATCTGAAATTCCCAA--ATTTC-TCTACACTGAGCA 2208306 Query 846 AGATCTTAAGAATGAACATGGAGAGTTATTCAAGTACTTGGGTGCGATTAGGYATCCTGA 905 ||||| | | | ||| |||||| | || ||| | |||| || ||| | ||||||| Sbjct 2208307 GGATCTCAGAAGTAAACTTGGAGAATGGTTTGAGTTCATGGGAGCCATTCGACATCCTGA 2208366 Query 906 TGCAATCAAATTAGCTCCGCGAAACTTTCCAAATCTTGCGTCAGCTGCATTTTACTGGAG 965 | |||||| | || || | || ||||| || | || || || ||| |||||| Sbjct 2208367 AGTAATCAAGCTTGCCCCAAGGTCATTCCCAAACCTATCTTCTGCCGCCCTTTTCTGGAG 2208426 Query 966 CAAAAAGGA 974 | ||||| Sbjct 2208427 CCGCAAGGA 2208435 Lambda K H 0.635 0.409 0.915 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28454236228000