Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= NC_030690.1
Length=8930
Score E
Sequences producing significant alignments: (Bits) Value
seq41 159 2e-35
>seq41
Length=21727748
Score = 159 bits (176), Expect = 2e-35
Identities = 261/369 (71%), Gaps = 12/369 (3%)
Strand=Plus/Plus
Query 612 AGCTATCGACTGGATTAATGGTCAACCATGGGTTGGAT-CCTTAGTCTTA-TCTT-TAAT 668
||||||||||||||| || ||||||||||| ||| ||||| || |||| ||||
Sbjct 2208073 AGCTATCGACTGGATCAACTCTCAACCATGGGCAGGAAACCTTATACTCGGTCTTCTAAT 2208132
Query 669 TACTACAGACTTTGAATCACCCGGGAAAGAATTCATGGATCAGATCAAGCTGGTTGCCAG 728
||||| ||||| ||||| || | |||| |||||||||| || | | ||||||| ||
Sbjct 2208133 GACTACT---TTTGAGTCACCAGGAAGAGAACTCATGGATCAAATTAGGATGGTTGCAAG 2208189
Query 729 TTATGCACAAATGACAACATACACTACAATCAAAGAGTACCTTAGTGAATGCATGGATGC 788
|||||| || |||||||| ||| | || |||||| |||||||| | | |||||||||||
Sbjct 2208190 TTATGCTCAGATGACAACTTACTCAACCATCAAACAGTACCTTGATCAGTGCATGGATGC 2208249
Query 789 AACACTAACGATTCCCGCAGTAGCATATGAGAT---CAAGGAGTTCATTAAGACTTCGTC 845
||||| || | || || || |||| ||| || ||| | ||| | | ||| |
Sbjct 2208250 TACACTCGCGCTCCCAGCTGTCGCATCTGAAATTCCCAA--ATTTC-TCTACACTGAGCA 2208306
Query 846 AGATCTTAAGAATGAACATGGAGAGTTATTCAAGTACTTGGGTGCGATTAGGYATCCTGA 905
||||| | | | ||| |||||| | || ||| | |||| || ||| | |||||||
Sbjct 2208307 GGATCTCAGAAGTAAACTTGGAGAATGGTTTGAGTTCATGGGAGCCATTCGACATCCTGA 2208366
Query 906 TGCAATCAAATTAGCTCCGCGAAACTTTCCAAATCTTGCGTCAGCTGCATTTTACTGGAG 965
| |||||| | || || | || ||||| || | || || || ||| ||||||
Sbjct 2208367 AGTAATCAAGCTTGCCCCAAGGTCATTCCCAAACCTATCTTCTGCCGCCCTTTTCTGGAG 2208426
Query 966 CAAAAAGGA 974
| |||||
Sbjct 2208427 CCGCAAGGA 2208435
Lambda K H
0.635 0.409 0.915
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 28454236228000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |