Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19] 20,500 sequences; 4,210,110,458 total letters Query= NC_030691.1 Length=8904 Score E Sequences producing significant alignments: (Bits) Value seq41 122 5e-24 >seq41 Length=21727748 Score = 122 bits (134), Expect = 5e-24 Identities = 255/376 (68%), Gaps = 22/376 (6%) Strand=Plus/Plus Query 616 AGCAATAGACTGGATCAATGGTCAACCATGGGTTGGTTCCTTGGTTCTA--TCA-CTGAT 672 ||| || ||||||||||| ||||||||||| || | | | || || || || Sbjct 2208073 AGCTATCGACTGGATCAACTCTCAACCATGGGCAGGAAACCTTATACTCGGTCTTCTAAT 2208132 Query 673 AACTACGGATTTTGAGTCTCCTGGTAAGGAGTTTATGGATCAAATCAAGTTAGTAGCAAG 732 ||||| ||||||||| || || | || | ||||||||||| | | | || ||||| Sbjct 2208133 GACTAC---TTTTGAGTCACCAGGAAGAGAACTCATGGATCAAATTAGGATGGTTGCAAG 2208189 Query 733 CTATGCACAAATGACTACATACACAACAATCAAAGAATACCTTGGTGAGTGTATGGATGC 792 ||||| || ||||| || ||| |||| |||||| | ||||||| | |||| |||||||| Sbjct 2208190 TTATGCTCAGATGACAACTTACTCAACCATCAAACAGTACCTTGATCAGTGCATGGATGC 2208249 Query 793 AACACTGGTTATCCCAGCTGTTGCATACGAAATCAAGGAATTTCT-TA-------AAGTT 844 ||||| | |||||||||| |||| ||||| ||||||| || || Sbjct 2208250 TACACTCGCGCTCCCAGCTGTCGCATCTGAAATTCCCAAATTTCTCTACACTGAGCAGGA 2208309 Query 845 TCGTCAGAATTAAAATCAGATCATGGAGATTTATTTAAATATCTCGGTGCAATTCGACAC 904 || |||||| |||| | |||||| | ||| | | | || || |||||||| Sbjct 2208310 TC-TCAGAAGTAAA-------CTTGGAGAATGGTTTGAGTTCATGGGAGCCATTCGACAT 2208361 Query 905 CAGGATGCTATTAAATTGGCTCCACGGAATTTCCCTAATTTAGCTTCTGCGGCTTTTTAT 964 | || | || || | || ||| || ||||| || || ||||||| || ||| Sbjct 2208362 CCTGAAGTAATCAAGCTTGCCCCAAGGTCATTCCCAAACCTATCTTCTGCCGCCCTTTTC 2208421 Query 965 TGGAGCAAGAAGGAAA 980 |||||| ||||||| Sbjct 2208422 TGGAGCCGCAAGGAAA 2208437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28371055416000