Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= NC_030691.1
Length=8904
Score E
Sequences producing significant alignments: (Bits) Value
seq41 122 5e-24
>seq41
Length=21727748
Score = 122 bits (134), Expect = 5e-24
Identities = 255/376 (68%), Gaps = 22/376 (6%)
Strand=Plus/Plus
Query 616 AGCAATAGACTGGATCAATGGTCAACCATGGGTTGGTTCCTTGGTTCTA--TCA-CTGAT 672
||| || ||||||||||| ||||||||||| || | | | || || || ||
Sbjct 2208073 AGCTATCGACTGGATCAACTCTCAACCATGGGCAGGAAACCTTATACTCGGTCTTCTAAT 2208132
Query 673 AACTACGGATTTTGAGTCTCCTGGTAAGGAGTTTATGGATCAAATCAAGTTAGTAGCAAG 732
||||| ||||||||| || || | || | ||||||||||| | | | || |||||
Sbjct 2208133 GACTAC---TTTTGAGTCACCAGGAAGAGAACTCATGGATCAAATTAGGATGGTTGCAAG 2208189
Query 733 CTATGCACAAATGACTACATACACAACAATCAAAGAATACCTTGGTGAGTGTATGGATGC 792
||||| || ||||| || ||| |||| |||||| | ||||||| | |||| ||||||||
Sbjct 2208190 TTATGCTCAGATGACAACTTACTCAACCATCAAACAGTACCTTGATCAGTGCATGGATGC 2208249
Query 793 AACACTGGTTATCCCAGCTGTTGCATACGAAATCAAGGAATTTCT-TA-------AAGTT 844
||||| | |||||||||| |||| ||||| ||||||| || ||
Sbjct 2208250 TACACTCGCGCTCCCAGCTGTCGCATCTGAAATTCCCAAATTTCTCTACACTGAGCAGGA 2208309
Query 845 TCGTCAGAATTAAAATCAGATCATGGAGATTTATTTAAATATCTCGGTGCAATTCGACAC 904
|| |||||| |||| | |||||| | ||| | | | || || ||||||||
Sbjct 2208310 TC-TCAGAAGTAAA-------CTTGGAGAATGGTTTGAGTTCATGGGAGCCATTCGACAT 2208361
Query 905 CAGGATGCTATTAAATTGGCTCCACGGAATTTCCCTAATTTAGCTTCTGCGGCTTTTTAT 964
| || | || || | || ||| || ||||| || || ||||||| || |||
Sbjct 2208362 CCTGAAGTAATCAAGCTTGCCCCAAGGTCATTCCCAAACCTATCTTCTGCCGCCCTTTTC 2208421
Query 965 TGGAGCAAGAAGGAAA 980
|||||| |||||||
Sbjct 2208422 TGGAGCCGCAAGGAAA 2208437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 28371055416000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |