Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19] 20,500 sequences; 4,210,110,458 total letters Query= NC_030701.1 Length=8798 Score E Sequences producing significant alignments: (Bits) Value seq41 95.1 7e-16 >seq41 Length=21727748 Score = 95.1 bits (104), Expect = 7e-16 Identities = 211/314 (67%), Gaps = 2/314 (1%) Strand=Plus/Plus Query 640 CTCCTAACAACTGATTTTGAATCTCCAGGGAAAGAGTTTATGGATCAAATTAAGCTTGTT 699 || |||| ||| |||||| || ||||| | ||| | ||||||||||||| | | ||| Sbjct 2208125 CTTCTAATGACTACTTTTGAGTCACCAGGAAGAGAACTCATGGATCAAATTAGGATGGTT 2208184 Query 700 GCCAGTTATGCCCAGATGACAACATATACCACTATAAAAGAATACCTGGCTGAATGTATG 759 || |||||||| ||||||||||| || | || || ||| | ||||| | | | || ||| Sbjct 2208185 GCAAGTTATGCTCAGATGACAACTTACTCAACCATCAAACAGTACCTTGATCAGTGCATG 2208244 Query 760 GATGCAACATTAACTATCCCTGCCGTGGCTCACGAGATACGTGAGTTTCTTGAGATCTCA 819 ||||| ||| | | |||| || || || || || | | ||||| | | || | Sbjct 2208245 GATGCTACACTCGCGCTCCCAGCTGTCGCATCTGAAATTCCCAAATTTCTCTACA-CTGA 2208303 Query 820 GC-GAAACTTAAGAATGAGCATGCTGAACTATTCCCATTTCTCGGAGCAATAAGGCACCC 878 || | | || | | | | | || ||| || || | ||||| || | || || Sbjct 2208304 GCAGGATCTCAGAAGTAAACTTGGAGAATGGTTTGAGTTCATGGGAGCCATTCGACATCC 2208363 Query 879 TGATGCCATCAAGCTAGCCCCACGTAGTTTTCCAAACCTAGCATCGGCTGCATTTTATTG 938 ||| | |||||||| |||||| | || ||||||||| | || || || ||| || Sbjct 2208364 TGAAGTAATCAAGCTTGCCCCAAGGTCATTCCCAAACCTATCTTCTGCCGCCCTTTTCTG 2208423 Query 939 GAGTAAGAAGGAAA 952 ||| ||||||| Sbjct 2208424 GAGCCGCAAGGAAA 2208437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28031933644000