Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq8 223 3e-54 seq16 185 7e-43 >seq8 Length=79101790 Score = 223 bits (246), Expect = 3e-54 Identities = 147/163 (90%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065 || |||||||||||||||||||| || ||||||||| |||||||||| ||||| |||||| Sbjct 77684284 AGAAGGTTTGAAATGGACCGGGAGCCCAAGAGTGCCCGATACTGTGCCGAGTGCAATAGG 77684343 Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125 ||||||||||||||||||| |||||||||||||||||||||||| | |||||||| || Sbjct 77684344 TTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGCTAGGCCTCAAGATT 77684403 Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168 || |||||||| || |||||||||||||||||||| ||||||| Sbjct 77684404 ACTTACTTTGCACTCATGGATGGAAAGGTGTATGACATCACAG 77684446 Score = 140 bits (154), Expect = 3e-29 Identities = 88/95 (93%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 5165 ACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTAT 5224 |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||| Sbjct 77684539 ACAGAGTGGGCTGGATGCCAACGTGTGGGAATTTCCCCAGATACCCACAGAGTCCCCTAT 77684598 Query 5225 CACATCCCATTTGGTTCACGGATGCCAGGTACCAG 5259 |||||| |||||||||| ||||| ||||| ||||| Sbjct 77684599 CACATCTCATTTGGTTCTCGGATCCCAGGCACCAG 77684633 >seq16 Length=57704787 Score = 185 bits (204), Expect = 7e-43 Identities = 207/278 (74%), Gaps = 23/278 (8%) Strand=Plus/Minus Query 4964 TCAATGAATACGATGATGTGCAACCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGAC 5023 ||||| | ||| | |||||| | | | || ||||||||||| || || |||| || || | Sbjct 15158202 TCAATAAGTACTACGATGTGTAGCTGTTGTCAGGGAAAGCACAGCAGCTTTGCAAGGGCC 15158143 Query 5024 CGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAA 5083 | ||||| ||||||||| ||||||||||||||||| ||||||||| || Sbjct 15158142 C--------AAGAGGGCCAGATACAGTGCTGAGTGTAATAGGTTGCATCCTG------AA 15158097 Query 5084 GGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATG 5143 || |||||||||| | |||||||||| || || ||||| | | || | ||| | || Sbjct 15158096 GGAGACTTTTGGGAAAAGTCAAGCATCTTAGGTCTCAAGAGAATTTATTCTGCACAGA-- 15158039 Query 5144 GATGGAAAGGTGTATGATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCA 5203 |||| || || ||||||||||||||||||||||| ||||| |||| |||||| Sbjct 15158038 ------AAGGCGTGTGTCATCACAGAGTGGGCTGGATGCCAATGTGTGTGAATTTCCCCA 15157985 Query 5204 GATACCCACAGAGTCCCTTATCACATCCCATTTGGTTC 5241 | || || ||||||| | ||||| || |||||||||| Sbjct 15157984 GGTA-CCGCAGAGTCTCCTATCATGTCACATTTGGTTC 15157948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40207399136848