Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinops_20telfairi_20[refseq_20GCF_5F000313985.1_202012-11-28] 8,402 sequences; 2,947,024,286 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq45 123 1e-25 seq12 98.7 6e-18 seq19 87.8 1e-14 seq83 80.6 2e-12 >seq45 Length=17893317 Score = 123 bits (136), Expect = 1e-25 Identities = 85/91 (93%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 930722 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCACCTCC 930663 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||||||||| |||| || || |||||||||| Sbjct 930662 CCGACGCGG-CGGG-CG-AG-ACGGGCCGGT 930636 >seq12 Length=64696486 Score = 98.7 bits (108), Expect = 6e-18 Identities = 67/74 (91%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||||||||||||||||||||||| |||||||| | ||| ||| |||||||||||| Sbjct 63303941 CTGCCCAGGCATAGTTCACCATCTTTCGAGTCCTAACACGTGCACTCATGCTCCACCTCC 63303882 Query 897 CCGACGCGGTCGGG 910 |||| |||| |||| Sbjct 63303881 CCGAGGCGG-CGGG 63303869 >seq19 Length=49175038 Score = 87.8 bits (96), Expect = 1e-14 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||| ||||||||||||||||||||| ||| |||||| | ||||||| |||||||| ||| Sbjct 32036616 CTGCACAGGCATAGTTCACCATCTTTTGGGCCCTAACACGTGCGCTCATGCTCCACGTCC 32036675 Query 897 CCGACGCGGTCGG 909 |||| |||| || Sbjct 32036676 CCGATACGGTGGG 32036688 >seq83 Length=8071411 Score = 80.6 bits (88), Expect = 2e-12 Identities = 74/90 (82%), Gaps = 4/90 (4%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||||||| |||||||||||||||||||||||| | || ||| || | ||||||| Sbjct 4592641 CTGCCCAGGCATCGTTCACCATCTTTCGGGTCCTAACAGAGGCACTCATGTTGCACCTCC 4592582 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGG 926 || || | || ||||| || | ||||||| Sbjct 4592581 CCAACCCCGT--GGTCG-AG-AGGGGCCGG 4592556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2860552124196