Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxodonta_20africana_20[refseq_20GCF_5F000001905.1_202009-07-15] 2,352 sequences; 3,196,738,102 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq14 86.0 4e-14 seq70 84.2 1e-13 seq40 77.0 2e-11 >seq14 Length=62548349 Score = 86.0 bits (94), Expect = 4e-14 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||||||||||||||||||||| |||||||||| | ||| ||| ||||||||||| Sbjct 59950526 CTGCCCAGGCATAGTTCACCATCTTTTGGGTCCTAACTCGTGCTCTCATGCTCCACCTCT 59950585 Query 897 CC 898 || Sbjct 59950586 CC 59950587 >seq70 Length=11865675 Score = 84.2 bits (92), Expect = 1e-13 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 839 GCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCC 898 ||||||||||| || ||||||||||||||||||| | ||||||| |||||||||||||| Sbjct 11560908 GCCCAGGCATAATTTGCCATCTTTCGGGTCCTAACACCTGCGCTCATGCTCCACCTCCCC 11560849 Query 899 G 899 | Sbjct 11560848 G 11560848 >seq40 Length=22139007 Score = 77.0 bits (84), Expect = 2e-11 Identities = 54/62 (87%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | | |||| ||||| | ||| Sbjct 21875089 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTATGCTCATGCTCTATTTCC 21875030 Query 897 CC 898 || Sbjct 21875029 CC 21875028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2860730611296