Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxodonta_20africana_20[refseq_20GCF_5F000001905.1_202009-07-15] 2,352 sequences; 3,196,738,102 total letters Query= NC_030690.1 Length=8930 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 4e-13 >seq2 Length=111286942 Score = 86.0 bits (94), Expect = 4e-13 Identities = 122/169 (72%), Gaps = 6/169 (4%) Strand=Plus/Minus Query 621 CTGGATTAATGGTCAACCATGGGTTGGATCCTTAGTCTTATCTTTAATTACTACAGACTT 680 |||||| | | | | ||||||| |||| | || ||||| | ||||||| | | || Sbjct 55841152 CTGGATCAGTTGATAGCCATGGGCTGGACCATTTGTCTTCAGTCTAATTACCATTGGTTT 55841093 Query 681 TGAATCACCCGGGAAAGAATTCATGGATCAGATCAAGC-TGGTTGCCAGTTATGCACAAA 739 | ||| ||| | |||||| | |||| || | || || |||| |||||||||||||||| Sbjct 55841092 TTAATGTCCCAGAAAAGAACTGATGGCACA-AGCACGCATGGTAGCCAGTTATGCACAAA 55841034 Query 740 TGACAACATACACTACAATCAAAGAGTACC----TTAGTGAATGCATGG 784 ||||||||| | ||||||| | ||||| ||||| ||| |||| Sbjct 55841033 TGACAACATGTAATACAATCCGTGGGTACCCAGAATAGTGCATGGATGG 55840985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28460046927232