Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orycteropus_20afer_20afer_20[refseq_20GCF_5F000298275.1_202012-09- 20] 22,509 sequences; 4,444,080,527 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq169 96.9 2e-17 seq317 82.4 4e-13 >seq169 Length=7442033 Score = 96.9 bits (106), Expect = 2e-17 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||| ||||||||||||||||||||||||||||||| | ||||||| |||||||||||| Sbjct 7011929 CTGCCTAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCACCTCC 7011988 Query 897 CCGACGCGGTCGG 909 || | |||| || Sbjct 7011989 CCAGCACGGTGGG 7012001 >seq317 Length=4077681 Score = 82.4 bits (90), Expect = 4e-13 Identities = 56/62 (90%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||| ||||||||| ||||||||| | || |||| |||||||||||| Sbjct 3076700 CTGCCCAGGCATAGTTCGCCATCTTTCTGGTCCTAACACGTG-GCTCATGCTCCACCTCC 3076758 Query 897 CC 898 || Sbjct 3076759 CC 3076760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2860135939482