Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202
012-01-23] 6,323 sequences; 3,103,808,406 total letters
Query= NC_001461.1
Length=12573
Score E
Sequences producing significant alignments: (Bits) Value
seq69 259 4e-65
>seq69
Length=14226257
Score = 259 bits (286), Expect = 4e-65
Identities = 155/163 (95%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 3177819 AGGAGGTTTGAAATGGACCGGGAGCCTAAGTGTGCCAGATACTGTGCTGAGTGTAATAGG 3177878
Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140
||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| |||
Sbjct 3177879 TTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTAGGCCTCAAGATC 3177938
Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183
||||||||||||||||||||||||||||||||||| |||||||
Sbjct 3177939 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGACATCACAG 3177981
Score = 127 bits (140), Expect = 2e-25
Identities = 76/80 (95%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 5181 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTC 5240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||
Sbjct 3178074 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATTTCCCCAGATACCCACAGAGTCCCCTATC 3178133
Query 5241 ACATCTCATTTGGTTCACGG 5260
|||||||||||||||| |||
Sbjct 3178134 ACATCTCATTTGGTTCTCGG 3178153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40115546227764
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |