Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202
012-01-23] 6,323 sequences; 3,103,808,406 total letters
Query= NC_030690.1
Length=8930
Score E
Sequences producing significant alignments: (Bits) Value
seq80 104 1e-18
>seq80
Length=12639005
Score = 104 bits (114), Expect = 1e-18
Identities = 133/178 (75%), Gaps = 4/178 (2%)
Strand=Plus/Minus
Query 616 ATCGACTGGATTAATGGTCAACCATGGGTTGGATCCTTAGTCTTATCTTTAATTACTACA 675
|| |||||||| | | | || |||||||||||| | || ||||| | ||||||| |
Sbjct 5375970 ATTGACTGGATCAGTTGACAGCCATGGGTTGGACCATTTGTCTTCAGTCTAATTACCATT 5375911
Query 676 GACTTTGAATCACCCGGGAAAGAATTCATGGATCAGATCAAGC-TGGTTGCCAGTTATGC 734
| ||| |||| ||| |||||||| | | ||| || | || | |||| |||||||| ||
Sbjct 5375910 GGTTTTTAATCTCCCAGGAAAGAACTGACGGAGCA-AGCACTCATGGTAGCCAGTTACGC 5375852
Query 735 ACAAATGACAACATACACTACAATCAAAGAGTACCTTAG-TGAATGCATGGATGCAAC 791
|||||||||||||| | ||||||| | || || || || | |||||||||| |||
Sbjct 5375851 ACAAATGACAACATGTAATACAATCCATGAATA-CTCAGAACAGTGCATGGATGGAAC 5375795
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 28458775476568
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |