Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_001461.1
Length=12573
Score E
Sequences producing significant alignments: (Bits) Value
seq742 250 2e-62
>seq742
Length=528353
Score = 250 bits (276), Expect = 2e-62
Identities = 153/163 (94%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 238746 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTAAGTGTAATAGG 238805
Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140
|| ||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||| |||
Sbjct 238806 CTACATCCTGCTGAGGAAGGAGACTTCTGGGCAGAGTCAAGCATGTTGGGTCTCAAGATC 238865
Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183
||||||||||| |||||||||||||||||||||| |||||||
Sbjct 238866 ACCTACTTTGCAGTGATGGATGGAAAGGTGTATGACATCACAG 238908
Score = 120 bits (132), Expect = 2e-23
Identities = 77/84 (92%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 5182 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTCA 5241
||| |||||||||||||||||||| || |||||||||||||||||||||||||| | |||
Sbjct 238998 AGAATGGGCTGGATGCCAGCGTGTAGGTATCTCCCCAGATACCCACAGAGTCCCCTATCA 239057
Query 5242 CATCTCATTTGGTTCACGGATGCC 5265
||||||||||||||| ||||| ||
Sbjct 239058 CATCTCATTTGGTTCTCGGATTCC 239081
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40115170268208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |