Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_003678.1
Length=12602
Score E
Sequences producing significant alignments: (Bits) Value
seq742 253 2e-63
>seq742
Length=528353
Score = 253 bits (280), Expect = 2e-63
Identities = 154/163 (94%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 238746 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTAAGTGTAATAGG 238805
Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125
|| ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| |||
Sbjct 238806 CTACATCCTGCTGAGGAAGGAGACTTCTGGGCAGAGTCAAGCATGTTGGGTCTCAAGATC 238865
Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168
||||||||||| |||||||||||||||||||||| |||||||
Sbjct 238866 ACCTACTTTGCAGTGATGGATGGAAAGGTGTATGACATCACAG 238908
Score = 132 bits (146), Expect = 4e-27
Identities = 85/93 (91%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 5167 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATCA 5226
||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||||
Sbjct 238998 AGAATGGGCTGGATGCCAGCGTGTAGGTATCTCCCCAGATACCCACAGAGTCCCCTATCA 239057
Query 5227 CATCCCATTTGGTTCACGGATGCCAGGTACCAG 5259
|||| |||||||||| ||||| ||||| |||||
Sbjct 239058 CATCTCATTTGGTTCTCGGATTCCAGGCACCAG 239090
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40207962797344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |