Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq3635 334 6e-88 seq1441 271 6e-69 >seq3635 Length=1482946 Score = 334 bits (370), Expect = 6e-88 Identities = 253/296 (85%), Gaps = 3/296 (1%) Strand=Plus/Minus Query 4965 CAATGAATACGATGATGTGCAACCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACC 5024 || ||||||| ||||||| ||||||||| || ||||||||||||||||| |||||| Sbjct 1325117 CAGTGAATACTCTGATGTGTGGCCGATGCCAAGGGAAGCATAGGAGGTTTGAGGTGGACC 1325058 Query 5025 GGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAG 5084 ||||||||||||||||||||||| ||||| |||| ||||||||| ||| |||||||||| Sbjct 1325057 AGGAACCTAAGAGTGCCAGATACTATGCTGCGTGTGATAGGCTGCGTCCCGCTGAGGAAG 1324998 Query 5085 GTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATGG 5144 | ||||||||||||| ||||||| ||||||||||||| |||||||||||||| ||||||| Sbjct 1324997 GGGACTTTTGGGCAGTGTCAAGCTTGTTGGGCCTCAAGATCACCTACTTTGCACTGATGG 1324938 Query 5145 ATGGAAAGGTGTATGATATCACAGAGTGGGCTGGATGCCAGCGT-GTGGGAATCTCCCCA 5203 |||||||||||||||| | |||| |||||||| || |||||||| | | ||||||||| Sbjct 1324937 ATGGAAAGGTGTATGACAACACACAGTGGGCTAGAGGCCAGCGTCCTAGATATCTCCCCA 1324878 Query 5204 GATACCCACAGAGTCCCTTATCACATCCCATTTGGTTCACGGATGCCAGGTACCAG 5259 | |||||||||||| | | || || |||||||||| ||||| ||||| ||||| Sbjct 1324877 G--ACCCACAGAGTCTCCTCACATCTCTCATTTGGTTCTCGGATTCCAGGCACCAG 1324824 >seq1441 Length=6574805 Score = 271 bits (300), Expect = 6e-69 Identities = 158/163 (97%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6234912 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGA 6234971 Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 6234972 CTGCATCCTGCTGAGGAAGGGGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGATC 6235031 Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168 ||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 6235032 ACCTACTTTGCACTGATGGATGGAAAGGTGTATGACATCACAG 6235074 Score = 140 bits (154), Expect = 3e-29 Identities = 88/95 (93%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 5165 ACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTAT 5224 |||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||| Sbjct 6235167 ACAGAGTGGGCTGGATGCCAGCGTGTAGGTATCTCCCCAGATACCCACAGAGTCCCCTAT 6235226 Query 5225 CACATCCCATTTGGTTCACGGATGCCAGGTACCAG 5259 |||||| |||||||||| ||||| ||||| ||||| Sbjct 6235227 CACATCTCATTTGGTTCTCGGATTCCAGGCACCAG 6235261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40206027985192