Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq3171 91.5 8e-16 seq3337 77.0 2e-11 >seq3171 Length=2389652 Score = 91.5 bits (100), Expect = 8e-16 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 || |||||| ||||| ||||||||||||||||||||| | |||||||||||||||||||| Sbjct 2004941 CTACCCAGGTATAGTCCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCACCTCC 2005000 Query 897 CCGACGCGGTCGGGT 911 | | || || ||||| Sbjct 2005001 CTGGCGTGG-CGGGT 2005014 >seq3337 Length=3448319 Score = 77.0 bits (84), Expect = 2e-11 Identities = 54/62 (87%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||| ||||| ||||||||| || |||| |||||||||| | Sbjct 517542 CTGCCCAGGCATAGTTCACCACCTTTCAGGTCCTAACATTTGTGCTCATGCTCCACCTTC 517483 Query 897 CC 898 || Sbjct 517482 CC 517481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2860462703634